Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01119 ATGACAAGTGGTGGATGCAGCATAGTTTGGTTCAGAAGAGATCTGAGAGTAGAAGATAACCCTGCACTTGCAGCAGGTGTTAGAGCAGGTGCTGTTGTTGCTGTTTTTATATGGGCACCTGAAGAAGAAGGTCAATATTATCCTGGTAGAGTTTCAAGATGGTGGCTTAAAAACAGTTTGTCTCAACTTGATTCATCTTTGAGAAGTCTTGGTACTCCTCTTATCACTAAAAGATCAACTGATAGTGTTTCTTCTTTACTTGAAGTTGTTAAGAACACTGGAGCCACTCAAATCTTTTTCAATCATTTATATGATCCATTATCACTTGTGAGGGATCACAAAGCAAAGGAGGTTCTAACAACTCAAGGCATTACCGTACGTTCATTTAACTCAGATTTATTGTATGAACCATGGGATGTGAATGATGAACATGACCAACCATTCACAACTTTTGATTCTTTTTGGGAAAGATGCCTTAGCATGCCTTATGACCCACAGGCACCTCTTCTCCCACCTAAAAGAATTATTCCAGGTGATGTATCAAGGTGTCCTTCTGATACATTGGTGTTTGAAGATGAATCAGAGAAAGCAAGTAATGCACTTCTTGCTCGAGCATGGTCACCAGGGTGGAGCAATGCAAACAAGGCATTGACAACGTTCATAAACGGTCCACTGATTGAGTATGCGAAAAATCGCAGGAAAGCTGACAGTGCTACAACCTCATTTCTCTCCCCGCATTTGCATTTCGGAGAAGTTAGCGTCAAGAAAGTATTCCATCTTGTCCGAATTAAGCAAGTCTTTTGGGCCAATGAAGGAAACCAAGCCGGCGAAGAAAGTGTAAACTTGTTTCTCAAATCGATTGGTCTTAGAGAGTATTCAAGGTACATTAGTTTCAACCACCCTTATAGTCATGAAAGGCCTCTTCTTGGACACCTTAAGTTTTTCCCTTGGGTGGTGAATGAAGGATATTTTAAGGCATGGAGACAAGGAAGGACAGGGTACCCTTTGGTGGATGCTGGAATGAGAGAGTTGTGGGCTACTGGTTGGCTTCATGATCGAATACGTGTTGTTGTTTCAAGTTTCTTTGTGAAGGTCTTGCAGCTTCCTTGGAGATGGGGGATGAAATATTTTTGGGATACCCTTTTGGATGCTGATCTTGAGAGTGATGCTCTTGGTTGGCAGTATATATCGGGTACTCTCCCTGATGGTCGTGAATTCGACAGAATTGATAATCCACAGTTTGAGGGATACAAATGCGATCCAAATGGAGAATACGTGCGACGCTGGCTTCCTGAACTTGCAAGATTGCCAACCGAATGGATACATCATCCATGGAATGCCCCAGAATCAGTACTACAAGCTGCTGGTATTGAACTTGGCTCAAACTACCCTCTTCCAATTGTGGAAATAGATGCAGCAACAGTGAGACTAGAGGAAGCACTTATACAAATGTGGCAACTAGAAGCAGCTTCAAGAGCTGCAGCGGAAAATGGAACCGAGGAAGGTCTTGGAGACTCATCTGAATCAACCCCTATTGCTTTTCCACAAGACATACAAATGGAAGAAATACATGAACCTGTTAGGAACAATCCACCTCACGGTACTCGGCGCTACGAGGATCAAATGGTACCGAGTATCACTTCTTCTAGGGTGAGAATGGAAGAAGAAGAAACTTCTTCGGTTCGAAACTCGGGAGAAGACAGCAGAGCTGAAGTGCCAACAAATGCAAATGGACAGCAAAATACAAGAGAGACGGAGAGCCAAGGAGTGCTGCAGAATGTAAATAGAAACACTAGACAACGGAATAATACTCCAACTACATTTTGGCTGAGAAATGCTCCTGAAGATTCGACAGCTGAATCTTCAAGTAGTACTAGAAGAGAGAGAGATGGAGGTGTAGTTCCTGAGTGGTCGCCACCGACTTCTAACTTCTCAGATCAATTTGTAGATGATGAAAATGGTATAGGATCCAGTTCACCTTACTTGCAGAGGCATCCACAGTCTCACCAATTGATGAGTTGGACGCGGCTACCTCAAACTGGATAA 2046 0.4296 MTSGGCSIVWFRRDLRVEDNPALAAGVRAGAVVAVFIWAPEEEGQYYPGRVSRWWLKNSLSQLDSSLRSLGTPLITKRSTDSVSSLLEVVKNTGATQIFFNHLYDPLSLVRDHKAKEVLTTQGITVRSFNSDLLYEPWDVNDEHDQPFTTFDSFWERCLSMPYDPQAPLLPPKRIIPGDVSRCPSDTLVFEDESEKASNALLARAWSPGWSNANKALTTFINGPLIEYAKNRRKADSATTSFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNQAGEESVNLFLKSIGLREYSRYISFNHPYSHERPLLGHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGREFDRIDNPQFEGYKCDPNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVEIDAATVRLEEALIQMWQLEAASRAAAENGTEEGLGDSSESTPIAFPQDIQMEEIHEPVRNNPPHGTRRYEDQMVPSITSSRVRMEEEETSSVRNSGEDSRAEVPTNANGQQNTRETESQGVLQNVNRNTRQRNNTPTTFWLRNAPEDSTAESSSSTRRERDGGVVPEWSPPTSNFSDQFVDDENGIGSSSPYLQRHPQSHQLMSWTRLPQTG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01119 681 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 5 134 IPR006050 -
Car02g01119 681 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 301 502 - -
Car02g01119 681 Gene3D - 134 293 - -
Car02g01119 681 Pfam FAD binding domain of DNA photolyase 283 479 IPR005101 -
Car02g01119 681 ProSitePatterns DNA photolyases class 1 signature 2. 352 371 IPR018394 -
Car02g01119 681 PANTHER CRYPTOCHROME-1 1 601 - -
Car02g01119 681 MobiDBLite consensus disorder prediction 526 681 - -
Car02g01119 681 MobiDBLite consensus disorder prediction 550 564 - -
Car02g01119 681 Gene3D HUPs 8 206 IPR014729 -
Car02g01119 681 MobiDBLite consensus disorder prediction 565 620 - -
Car02g01119 681 PANTHER CRYPTOCHROME 1 601 IPR002081 -
Car02g01119 681 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 7 178 IPR036155 -
Car02g01119 681 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 194 488 IPR036134 -
Car02g01119 681 TIGRFAM crypt_chrom_pln: cryptochrome, plant family 6 481 IPR014134 GO:0009785|GO:0009882
Car02g01119 681 Pfam DNA photolyase 7 163 IPR006050 -
Car02g01119 681 ProSitePatterns DNA photolyases class 1 signature 1. 332 344 IPR018394 -
Car02g01119 681 Pfam Blue/Ultraviolet sensing protein C terminal 511 626 IPR020978 -
Car02g01119 681 PRINTS DNA photolyase signature 332 348 IPR002081 -
Car02g01119 681 PRINTS DNA photolyase signature 352 370 IPR002081 -
Car02g01119 681 PRINTS DNA photolyase signature 391 405 IPR002081 -
Car02g01119 681 MobiDBLite consensus disorder prediction 638 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01119 Car-Chr2 31703358 31709400 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01119 K12118 - gmx:100786551 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01119 02 31703358 31709400 Car02g01119 02 31703358 31709400 ECH