LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car02g01107	ATGGATTCTGGCAATAGTGGAAGTATTTCTTCAAGTGGTGATGAAGAATATGATTCAAGAACTAATCATCAATATCATCAAACACTTCTCCCTTCAACTTTCCTCAATCAACAACAACAACCCACTCTTCAATTTGGTTCCATATTCTCACACAATCCACAACAATCTTCCCTTATTTCCTCGTCATTTCATCACCATCACAACCCTTCTTTGTTTGATCTTTCACCAAACTACCTCCACTCTCTCTCTCAATCTCAACCAAACATAAACCCCTTTCAAAATTTAAACACCACAACATCTCAAGGAGTACTTTCATCATCATCACAACAACACATAAACCATACTTTGTTAACTCCTCAAATACTTCATGATGATGATaacaataacaatgtaagaacaacaacaacaacatcaacaacaaatgtagcaagaaactcaaagaagagaacaagaGCTTCGAGAAGAGCACCAACAACTGTTCTCACAACCGATACTTCAAATTTCAGATCCATGGTTCAAGAATTTACTGGTATCCCTGCACCACCTTTTTCTAGTTCTTCTTACTCTCGCAGACTTGATCTTCTCACTGCTTCATCTTCTTTAAGATCAActtcttcttcttcttcttcttcttctCACTTTGATAcatcatcttctttctaccctcttcgtccatcaccacaaaaacatgatcatcatcatcatcTAAATCCATTGCTTTTATCTTCAACATCACCACCTTCTTCTTCCACCTTGTTGCATAACAACAATATACATAATTATCAACTACCATGTGATTTGGGTTTACCTAATTATAATCAACATAACTTCATGCTTAGTATGCAAAATCAACCTATTCACACATTCCATCCTTCTTCATCTTCACAACAATTTCATCCTCCTTTTAACAACATAGAAAGGTTTAGTTCAAAGTCACAACAACAAGCTGCAAGTTTATCTGTTCAATCTCTTGAAGATCTTGGTGTGAATCAAGGACAAGTTAATGCTAATCTAGATGATAATGATGGTGATGGAAGTAGAAGAGATGTGTTAAGGTGTTTGAATGAAAGTTATGGTGGTAAAATTGTTGGTTCTTCTTCTTCTTCAGGTGGTGGTGGTGGTAAGGTTAATTTTTCAGGTTCTGCATCAACCACGTTGAATCATGACAAGACATTGGAGaataataataataataataacaacaataataataGAGGAGAAGGTGATGTTGGTTCGTGGATTTGTTCTTCTGATTAG	1257	0.3095	MDSGNSGSISSSGDEEYDSRTNHQYHQTLLPSTFLNQQQQPTLQFGSIFSHNPQQSSLISSSFHHHHNPSLFDLSPNYLHSLSQSQPNINPFQNLNTTTSQGVLSSSSQQHINHTLLTPQILHDDDNNNNVRTTTTTSTTNVARNSKKRTRASRRAPTTVLTTDTSNFRSMVQEFTGIPAPPFSSSSYSRRLDLLTASSSLRSTSSSSSSSSHFDTSSSFYPLRPSPQKHDHHHHLNPLLLSSTSPPSSSTLLHNNNIHNYQLPCDLGLPNYNQHNFMLSMQNQPIHTFHPSSSSQQFHPPFNNIERFSSKSQQQAASLSVQSLEDLGVNQGQVNANLDDNDGDGSRRDVLRCLNESYGGKIVGSSSSSGGGGGKVNFSGSASTTLNHDKTLENNNNNNNNNNNRGEGDVGSWICSSD	418

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car02g01107	418	PANTHER	VQ MOTIF-CONTAINING PROTEIN	1	416	IPR039609	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	200	224	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	89	109	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	121	146	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	362	418	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	1	15	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	121	161	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	1	21	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	200	253	-	-
	Car02g01107	418	MobiDBLite	consensus disorder prediction	238	253	-	-
	Car02g01107	418	PANTHER	VQ MOTIF-CONTAINING PROTEIN	1	416	-	-
	Car02g01107	418	Pfam	VQ motif	155	182	IPR008889	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car02g01107	-		-	mtr:MTR_5g063310	339.732

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car02g01107	02	31107475	31109497	Car02g01107	02	31107475	31109497	ECH