Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01049 ATGACATTGCATCTTCAAATGAGTTTACCAATTTCATTGGTTCTAGTAATCATTTTATCAGGGCAAAGAACATGTGAGTCGGCACGAGTATTTACTATAGTAAACTACTGTAAGGAGACTGTCTGGCCAGCTGTAATACCTGGGGAAAAGTTCAACGGTGGAGGCTTCGTCCTAAAGCCAGGACAATCCTCCGTTTTCACTGCCCCAATCAGTTGGAGTGGCCGAATTTGGGCTCGAACAGGCTGCAACTTCGACCAAGATGGAAACGGTCCATGCCAAACCGGTTCATGTGGCACAACATTGAAATGTGGAGGCGCAGGAAAAACCCCTGCATCACTAGCTGAATTCACACTGGCTCAACCTGATTTCTATGACGTTAGTCTCGTTGATGGGTTCAACGTGCCCATTTCCGTTAAGCCTTTAAATGGAAAGGGAAATTGCTCCACTGCAGGTTGTGATTCTGACCTTAGATTAACTTGTCCTAAAGAACTTTCCGTTAAGGCTAACGGTAAGACCATTGGGTGTCGAAGTGCTTGTGATGTGTTTAATACTGATGAATATTGTTGTAGAGGGAATTTTGGGAACCCTTCTACTTGTAGACCCACTTTTTATTCGAAGAAATTTAAGGAGGCTTGTCCAACTTCATATAGTTATGCTTATGATGATCCAACTAGTATTTTCACTTGCACAGGAACAGACTACATCATCGCTTTCTGTGCTGACAGGAAAAAACAGATGTGCACTTACCATGATCACAAACTTCATTGTAGTGGATCGCAAGGCTTAAGGTCATTGATTAGAAGCTGGTGGATGGCAATGATAATGGTGTTTTCGATGCTTAGTAAATTTTATGAGTTTGTATAA 864 0.4213 MTLHLQMSLPISLVLVIILSGQRTCESARVFTIVNYCKETVWPAVIPGEKFNGGGFVLKPGQSSVFTAPISWSGRIWARTGCNFDQDGNGPCQTGSCGTTLKCGGAGKTPASLAEFTLAQPDFYDVSLVDGFNVPISVKPLNGKGNCSTAGCDSDLRLTCPKELSVKANGKTIGCRSACDVFNTDEYCCRGNFGNPSTCRPTFYSKKFKEACPTSYSYAYDDPTSIFTCTGTDYIIAFCADRKKQMCTYHDHKLHCSGSQGLRSLIRSWWMAMIMVFSMLSKFYEFV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01049 287 CDD TLP-PA 30 239 - -
Car02g01049 287 PIRSF PR5 1 282 IPR001938 -
Car02g01049 287 PANTHER OS03G0233200 PROTEIN 11 254 IPR001938 -
Car02g01049 287 Gene3D Thaumatin 30 239 IPR037176 -
Car02g01049 287 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Car02g01049 287 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Car02g01049 287 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Car02g01049 287 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Car02g01049 287 PRINTS Pathogenesis-related protein signature 122 138 IPR001938 -
Car02g01049 287 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Car02g01049 287 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 11 254 - -
Car02g01049 287 Pfam Thaumatin family 35 239 IPR001938 -
Car02g01049 287 SUPERFAMILY Osmotin, thaumatin-like protein 30 240 IPR037176 -
Car02g01049 287 SMART tha2 31 240 IPR001938 -
Car02g01049 287 ProSiteProfiles Thaumatin family profile. 28 239 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01049 Car-Chr2 24818758 24821453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01049 1 246 Receptor kinase-like Gene Family AT5G38280 40.385 4.03e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01049 - - gmx:100813659 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01049 02 24818758 24821453 Car02g01049 02 24818758 24821453 ECH