Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00987 atgtcatctcatGTGCCCTTGGGTTGTGTCACCCCATTTGCCATAGTGAATGACTCAGCACGAGACGTTGCACTGTTATTGGATCAAGGGTTCAAGACTCAAGAATACTGCTTCTTCCATCCATTGTCGAATGACATGTCCATATCTTTAAATGCTCATGACCTTGACAAATTTCTAAAGTCAATAGGAAGGGATCCGTCATATGTTGATTTTGAGGCCAATCCTACTGTGAGTAAAGATCAACCTCCTGATCTAGCTGCTCTAGTTCCACCCAGCTTAGGAGTTATGCCCCAACAATCTGAAACACAACCTTCATCACAAGTTCCTGCAGATGGAAACCATGTTTCTGTTAATAATAAGTCCCAGACAGTTTCAGTAAAAGATGTCAAGCCATCCGTTATTAAGAATGTTACCAAGGAGAAATCAGTCAACAATGCTCATTCACCAGGCTCCTTTGCAGATGTTGGGCCGTTTGTTGAAGAAATATTGCATAAAACATCAGAATTATTGCTTTCAGAGATCAAAGAAGACACAATAAAACAACAAGGGGAACATCTAGGCACGGCAGTGTCTGACAATCTACGGAAACATCTTGTCTCATATTTGAAAAACCATGCTATGATATTTAAGAACACAGCATACACAGAAGGGTTTCATGCTGGTGTTCAACATCAACAGAGACATTTCTGA 690 0.4 MSSHVPLGCVTPFAIVNDSARDVALLLDQGFKTQEYCFFHPLSNDMSISLNAHDLDKFLKSIGRDPSYVDFEANPTVSKDQPPDLAALVPPSLGVMPQQSETQPSSQVPADGNHVSVNNKSQTVSVKDVKPSVIKNVTKEKSVNNAHSPGSFADVGPFVEEILHKTSELLLSEIKEDTIKQQGEHLGTAVSDNLRKHLVSYLKNHAMIFKNTAYTEGFHAGVQHQQRHF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00987 229 Pfam Aminoacyl-tRNA editing domain 4 58 IPR007214 GO:0002161
Car02g00987 229 Gene3D - 2 78 IPR036754 GO:0002161
Car02g00987 229 MobiDBLite consensus disorder prediction 95 113 - -
Car02g00987 229 MobiDBLite consensus disorder prediction 94 113 - -
Car02g00987 229 PANTHER PROLYL-TRNA SYNTHETASE ASSOCIATED DOMAIN-CONTAINING PROTEIN 1-RELATED 5 227 - -
Car02g00987 229 SUPERFAMILY YbaK/ProRS associated domain 4 71 IPR036754 GO:0002161
Car02g00987 229 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 5 227 IPR040285 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00987 Car-Chr2 18277114 18297476 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00987 - - gmx:100812776 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00987 02 18277114 18297476 Car02g00987 02 18277114 18297476 ECH