Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00961 ATGATAGTCAGGTTAGGACTCATAGTTGCTGCTTCCTTAGCAGCTTTTACAGTTAAGCAGCTGAATGTTGGAGGTTCAAAACCAGAACATGGTGAAGCAAGGTCTAAAAAGCATCAACATGAGGGCACAGAACAAGAGCAGCTCACTAGTATTGCAGATGTTGATTCTCTTGAAAGGACTGATAGggaggaggaggaagaggagaaagaggaggTTAAGTTAATTAGCAGCATAATTAATCGAGCTAATGATTTCGAAGATGATGATATTCTACCAGAATTTGAAGATCTTTTATCTGGAGAGATTGAGTTATCATTTCCTGGTAGTGATGATAAGGTTGAGAAGGACAGAGTCTACGAAATCGAGATGGCATACAATGACAGCGAATTAGAACGATTGCGGCAGTTAGTGAAGGAATTGGAGGAAAGGGAAGTGAAACTCGAAGGAGAATTGCTCGAATACTACGGTTTGAAGGAGCAGGAATCAGACATTGTGGAGTTACAAAGGCAGCTGAAAATTAAGACGGTTGAAATTGACATGCTTAATATAACAATTAATTCGTTGCAGGCGGAGAGGAAGAAGCTTCAAGAAGAGCTCACACATGGAGGTTCATCAAAGAGAGAACTTGAAGTGGCTAGAAACAAGATAAAGGAGTTACAAAGACAGATACAGCTTGAGTCTAACCAAACAAAAGGTCAACTTTTGTTGCTTAAACAACAAGTTTCTGGCCTACAAGTGAAAGAAGAAGTTGCTGCAAGAAAAGATGCtgagattgaaaagaaattgaaatctgttaatgtgttagaagttgaagttgTGGAGCTTAAGAGGAAAAATAAAGAACTTCAACACGAGAAGCGAGAGCTAACTATTAAACTCCAAGCTGCTGAATCTAGAGTAGCAGAGCTCTCCAATATGACTGAGAGTGAAATGGTTGCCAAGGCGAATGAGGAGGTGAGTAACCTGAGACATGCAAATGAAGACCTTTTGAAGCAAGTGGAAGGACTTCAGATGAATAGGTTTAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTCAACGCGTGTTTGAGGTATGAGCTAAAGAATCAGCAGGCGCCCTCGGGAAAACTATCAGCGCGCGACCTCAGCAAGAATCTTAGTCCGAAATCACAAGCGAGGGCGAAGCAGCTGATGTTAGAATACGCCGGATCAGAACGAGGTCAAGGTGACACAGATCTTGATAGCAACTTCTCTCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCTATTGATAGCTTTACTAGCAAATATAGTACTCTTAGCAAGAAAACTAGCCTAATCCAAAAATTGAAGAAATGGGGTGGTAAAAGCAAAGATGATTCTAGTGCTCTTTCATCACCATCAAGATCTTTTTCAGGAAGTTCTCCAAGAAGGATGAGTATGAATATTAGATCTAAGGGTCCACTTGAAAGCTTGATGATAAGGAATGCCGGTGATAGTGTAGCCATCACCACGTTCGGGCAGGGTGATCAGGAATCTACTACTTACTCTCCCGGTAGTGCTGATCTAAGAAAAGTTGCATCCACTGATTCACTAAATTCTGTTTCTGCTTCATTCCAATTGATGTCCAAGTCAGTTGAGGCGACCGCGGAAGAAAAATACCCCGCATATAAAGATCGACATAAATTGGCCTTGGCTAGGGAGAAAGATCTAAACTCAAAGGCTGAAAAAGCAAGAGTGCAGAAGTTTGGTGACAATTCAAATTTGAATATGACCAAGGGTGAAAGAGAGAGACCACCTATTGCATCTTTGCCACCTAAACTTTCTCAAATAAAGGAGAAGCCATTTGTTCCTGTTAGTGATCCAAATGATCAATCTCAGGATGGAAAGAATGTTGAAAATCAAAGCATTAGCAAGATGAAGCTAGTCGACATCGAGAAAAGGCCTACTAGGGTGCCTAGGCCACCTCCTAAACCATCTGGTGCTGGTTCCGATAATGCTCCTTCGAGTGGAATACCATCTGCTACATCTGTtcctccacctcctcctcctcctcgtccaccaggtggtccgcctccaccacctcctcccccAAGAGGCCTATCAAAAGGGGCATTGGATGGCGACAAAGTTCATCGAGCTCCACAACTAGTTGAATTTTATCAATCATTGATGAAACGGGAAGCAAAGAAGGATACTTCTTCACTATTAGTTTCTTCTTCAACAAGTAACACATCTGATGCAAGGAGCAACATGATTGGGGAGATTGAGAATAGATCAACATTCCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATATCCTTGGCAACTGAAGTAAGAGCAGCCTCCTTCTCAGATATCAATGACCTGCTTGCCTTTGTGAACTGGCTAGATGAGGAGCTTTCCTTCCTGGTTGATGAACGAGCTGTCCTGAAGCACTTTGATTGGCCTGAAGGGAAAGCGGATGCACTAAGGGAAGCAGCTTTTGAATATCAAGATCTGATGAAATTGGAGAAGCAAGTCTCTACCTTTATTGATGATCCCAAACTCTCATGTGATGCTGCCCTGAGGAAAATGTATTCCTTGCTTGAAAAAGTGGAGCAAAGTGTATATGCACTATTGCGAACAAGAGATATGGCTATTTCACGGTACAGAGAATTTGGAATCCCAATAAATTGGCTACAAGATTCCGGAGTTGTAGGCAAGATTAAACTTTCTTCTGTACAACTGGCAAAGAAGTATATGAAACGTGTTGCATCTGAACTTGATGAGCTATCTGGACCTGAGAAGGAACCAACTAGAGAGTTCTTGATTCTACAAGGCGTTCGTTTTGCTTTCCGGATACATCAGTTTGCAGGAGGATTTGATGCAGAGAGCATGAAGGCTTTTGAAGACTTGCGAAGCCGCATCCAAACCCCTCAAGTTGGTGAAGAAGATAGTAAACCAGAAACATAG 2961 0.3975 MIVRLGLIVAASLAAFTVKQLNVGGSKPEHGEARSKKHQHEGTEQEQLTSIADVDSLERTDREEEEEEKEEVKLISSIINRANDFEDDDILPEFEDLLSGEIELSFPGSDDKVEKDRVYEIEMAYNDSELERLRQLVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELTHGGSSKRELEVARNKIKELQRQIQLESNQTKGQLLLLKQQVSGLQVKEEVAARKDAEIEKKLKSVNVLEVEVVELKRKNKELQHEKRELTIKLQAAESRVAELSNMTESEMVAKANEEVSNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELKNQQAPSGKLSARDLSKNLSPKSQARAKQLMLEYAGSERGQGDTDLDSNFSHPSSPGSEDFDNASIDSFTSKYSTLSKKTSLIQKLKKWGGKSKDDSSALSSPSRSFSGSSPRRMSMNIRSKGPLESLMIRNAGDSVAITTFGQGDQESTTYSPGSADLRKVASTDSLNSVSASFQLMSKSVEATAEEKYPAYKDRHKLALAREKDLNSKAEKARVQKFGDNSNLNMTKGERERPPIASLPPKLSQIKEKPFVPVSDPNDQSQDGKNVENQSISKMKLVDIEKRPTRVPRPPPKPSGAGSDNAPSSGIPSATSVPPPPPPPRPPGGPPPPPPPPRGLSKGALDGDKVHRAPQLVEFYQSLMKREAKKDTSSLLVSSSTSNTSDARSNMIGEIENRSTFLLAVKADVETQGDFVISLATEVRAASFSDINDLLAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKQVSTFIDDPKLSCDAALRKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPINWLQDSGVVGKIKLSSVQLAKKYMKRVASELDELSGPEKEPTREFLILQGVRFAFRIHQFAGGFDAESMKAFEDLRSRIQTPQVGEEDSKPET 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00961 986 MobiDBLite consensus disorder prediction 456 478 - -
Car02g00961 986 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 981 IPR040265 -
Car02g00961 986 MobiDBLite consensus disorder prediction 29 44 - -
Car02g00961 986 Coils Coil 123 153 - -
Car02g00961 986 Coils Coil 157 198 - -
Car02g00961 986 Coils Coil 202 229 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 671 698 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 24 71 - -
Car02g00961 986 Coils Coil 312 339 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 565 704 - -
Car02g00961 986 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 981 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 399 424 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 617 635 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 403 424 - -
Car02g00961 986 MobiDBLite consensus disorder prediction 452 488 - -
Car02g00961 986 Coils Coil 258 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00961 Car-Chr2 16590451 16595633 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00961 - - mtr:MTR_5g053270 1421.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00961 02 16590451 16595633 Car02g00961 02 16590451 16595633 ECH