Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00937 ATGACTCGATCTAAGAAGAAGGCCAACCGCAATGATCGCATTGATCGAATTAGTGACTTACCAAGCAATGTCATTGATGCTATCCTAGAACACTTGAACATAGTAGACCTAGTTAAGACCAGTATTCTGTCTAGAAAGTGGAGGTATATGTGGATGTCAGTCCAACAACTTGTGTTTAAAAGAGACTTTTTTATCATGTTCGAGCATCTTGATGATCCTGGCCCTGAGGCTTCTAGAATCATCTCAAAAATTCTTTTACTCCATAATGGACCTATATATAAGTTTACTCTTTTCCTCCCTCGCACCTTAAACTTCACGATCAGAACTGAATGCATCAGTAAGTGGATTCTGTTTTTGTCAACAAGGGGCATTAAATATCTTGAGCTTCAGAACGATGTAATACTTTCTACTGAAATGCTGCCATCTCATATTTTCTCTTGTCAAGAATTGCGTCACTTTCGACTTTGCAGATTTAGCTTGACAGTTCCACCTAATTTCTGTGGCTTTAAAAGTTTGTTGGACCTTAACTTTCAACAGATTATACTTAGGTGCGGTACACTTGAGAGTCTTATTTCTGGCTGCCCATCACTTGAAAAGCTCAGTATAGAATTGGTTCAAGATATGAAGCCAATTTGTCTCGAGAAAGTGAAGAATCTGATTGATCTTACACTCACGATTAGCCGGGAGTGTTCATCTGGTTTGATCAAAAGTTTGCCAAAAATTCAGAGGCTTGCTGTACAATCATGTTACCAGAAGAGGCAGTATGCAGATATCATATCTCCGACGCAGCTGATAAGCTTAACGCATCTGAAATTTGGTGCCGTGAATTTTGATGAAAGAACAAAACTTTTGTATATTGTTAGTGTACTCAAAAGTGCTTCTAACCTGGTGGAACTTATTATAGAGAGCAATTACCATAATGGTGAACCAGAGCCAGACCAACCAGAGGAGTTACAATGCAATAGTTGTTGCCTTAGCCAACTTCAGACGGCAAATATCAAAGTTGGAAGCACCTTTAAACATGCATTGAGTTTGATACGGTTCATACTTGCAAATGCCTCATCATTAAAGACTCTTACTTTTAGTGTTGATTTTGATTATAAGAAAGTAGATGCACCTCTGATGTTTCGCATTTCACAAGACTTGTTATGGATGAAACGAGCATCACAAAGAGCACGCGTTGAATTCCTTTACTCATAG 1200 0.385 MTRSKKKANRNDRIDRISDLPSNVIDAILEHLNIVDLVKTSILSRKWRYMWMSVQQLVFKRDFFIMFEHLDDPGPEASRIISKILLLHNGPIYKFTLFLPRTLNFTIRTECISKWILFLSTRGIKYLELQNDVILSTEMLPSHIFSCQELRHFRLCRFSLTVPPNFCGFKSLLDLNFQQIILRCGTLESLISGCPSLEKLSIELVQDMKPICLEKVKNLIDLTLTISRECSSGLIKSLPKIQRLAVQSCYQKRQYADIISPTQLISLTHLKFGAVNFDERTKLLYIVSVLKSASNLVELIIESNYHNGEPEPDQPEELQCNSCCLSQLQTANIKVGSTFKHALSLIRFILANASSLKTLTFSVDFDYKKVDAPLMFRISQDLLWMKRASQRARVEFLYS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00937 399 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 1 369 - -
Car02g00937 399 SUPERFAMILY F-box domain 13 96 IPR036047 GO:0005515
Car02g00937 399 ProSiteProfiles F-box domain profile. 14 62 IPR001810 GO:0005515
Car02g00937 399 SMART 9598neu4hmm 322 397 IPR006566 -
Car02g00937 399 SMART fbox_2 20 61 IPR001810 GO:0005515
Car02g00937 399 Gene3D - 2 67 - -
Car02g00937 399 SUPERFAMILY RNI-like 115 309 - -
Car02g00937 399 PANTHER CYCLIN-LIKE F-BOX 1 369 - -
Car02g00937 399 Gene3D Ribonuclease Inhibitor 92 364 IPR032675 -
Car02g00937 399 Pfam F-box domain 17 53 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00937 Car-Chr2 15754391 15757339 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00937 - - cam:101500487 791.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00937 02 15754391 15757339 Car02g00937 02 15754391 15757339 ECH