Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00928 ATGGGTTACATGTTAATTTTTCTAATGGTGTATTTGGTTGGAGGAGTTTGGAGTGTAGAGGACATAAGCGCACATCCCAAAGGCGCACATTGCAAAGGCGCACATCCCATAGGCGCACATTGCAAAGGCGCCTTGTATCACCATTCACCAGACAACAGTTCCTTCTATCACCACCACATCTCAAAGGCGCACATTGCTCTCACGCGCCACCAGCAGTTGCATTTAACATCGTCCGAACTTTTGCTTATGACTCAGTCCAAGAAGAAGGCTGATTGTGGTGATCACACTGATCTAATAACTGACTTACCATGGAATGTCATTGATGGCATCCTAAAATACTTGAACATTCGTGAATTAGTTGGTACTAGTATTCTGTCAAGAAAGTGGAGGTATATGTGGATGTCAGTCCTGCAACTTGAGTTTGACGAAGATTTCTTTTATTATTGCGAGGAGTATTATGAAGGCCCTGAAATTTCGAGAATTATGATGGAAATTCTTATGCTTCATAGTGGGCCACTATATAAGTTCACTCTTTCCTTACCTTCAGACTTCATGCAAATTGATTGCCTTGATGAGCTGATTCTGTTTTTGTCAACAAGTGGCATTAAAGATCTTGAACTTCAGAACCTCGGTTTTAGAACATTATCCTATCAAGTGCCATCTTATGTCTTCTCTTGTCAAGAGTTGACTAGCTTGGATCTTAACGGATTTGAATTGTCAGTTCCGCCTAATTTTGGTGGCCTTAAAAGATTGATTGTCCTTAACTTTCACCTTGTTACATTTGAGTCTGGTGCACTTGAGAAACTTATTCCTGGTTTCCCATTACTTGAAAGGCTCACCATTTCATTCTGTTCTGGTTTGGAATGTATTGATTTATCGGCTCCTACTCTCAAAGTCCTGCGCATAAACTCTGAAGGTAACATCAAGACAATTAGTCTGAAGAATGCAAATAATTTGATTGATTTTTCACTCTTGGATTATCGGGACGAAGACAGTGAGAGTGTTGGCGTATCTTGTTTGATCAAAAGTTTGCCAAAAATTCAGAGACTTGTTATGGAAATATTTTCTTTCTACTATAAGGTATTGTATGCTGCAGGTGGCATTCGGCAGTCACTGGTAGATTCATTTAGCTCCTTAGAGTATCTACAATTTGTTGGCACAAAATTGTGCGAAAGAGAAGGAGTTTTGTATATTGTTAGTGTATTAACTAATACTCCTAACCTGGTGGAGCTTGTTGTAAAGaattatgaatatggtgattatgatgaCGAACAAGAGCCAGACCAGACGAAGGAGTTAGAAAGCAATGGGTGTTGCCTTGGTCAACTTCGTAAAGTGAAGATTGAGATTGGAAGTAGGTTTAAATATTCATTGAATTTGATACGGTTCATACTTGCAAATTCTCCCTTGTTAGAGACTCTAACTTTTAAAGTTGGTATTGGTTTAAAACAAATAGAACTGCCTGCGCAACTAAGCATTTCACGAGACTTGTTATGGATGAAACGGGCATCACAAAAAGCACAAGTCGAGTTCATTCATAGTAAGCAGTAA 1551 0.3868 MGYMLIFLMVYLVGGVWSVEDISAHPKGAHCKGAHPIGAHCKGALYHHSPDNSSFYHHHISKAHIALTRHQQLHLTSSELLLMTQSKKKADCGDHTDLITDLPWNVIDGILKYLNIRELVGTSILSRKWRYMWMSVLQLEFDEDFFYYCEEYYEGPEISRIMMEILMLHSGPLYKFTLSLPSDFMQIDCLDELILFLSTSGIKDLELQNLGFRTLSYQVPSYVFSCQELTSLDLNGFELSVPPNFGGLKRLIVLNFHLVTFESGALEKLIPGFPLLERLTISFCSGLECIDLSAPTLKVLRINSEGNIKTISLKNANNLIDFSLLDYRDEDSESVGVSCLIKSLPKIQRLVMEIFSFYYKVLYAAGGIRQSLVDSFSSLEYLQFVGTKLCEREGVLYIVSVLTNTPNLVELVVKNYEYGDYDDEQEPDQTKELESNGCCLGQLRKVKIEIGSRFKYSLNLIRFILANSPLLETLTFKVGIGLKQIELPAQLSISRDLLWMKRASQKAQVEFIHSKQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00928 516 Gene3D Ribonuclease Inhibitor 163 453 IPR032675 -
Car02g00928 516 SUPERFAMILY F-box domain 96 166 IPR036047 GO:0005515
Car02g00928 516 PANTHER CYCLIN-LIKE F-BOX 83 480 - -
Car02g00928 516 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 83 480 - -
Car02g00928 516 SUPERFAMILY RNI-like 196 416 - -
Car02g00928 516 ProSiteProfiles F-box domain profile. 96 148 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00928 Car-Chr2 15273341 15276979 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00928 85 300 EF-hand Containing Proteins AT5G41840 24.481 7.85e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00928 - - cam:101503681 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00928 02 15273341 15276979 Car02g00928 02 15273341 15276979 ECH