Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00791 ATGAACGCAAACAGCACGCAATCGAAGAAGTTGGAGATTCCAATAAACGACGCCGTTTCCAGAATCCGATTTGCATCTCACTCTAACAACCTCCTCATTTCATCATGGGACTCTAATCTTCGTTTATATGATTTCGACGCCTCTGTGCTCAGACTCGAAGCTCCTTCACAAGCTTCTCTTCTCGATTGTTGTTTCCAAGATGATAATGACTCCGTTGCTTTCACTGCTGCTTCTGATGGATTCATCCGAAGGTATGACTTGCATTCTGGAATTATTGACCCAGTGGGTAGTCACGATGACATGGCAACATGTATTGGATATTCCAATGAAACATGTCTGTTAATTACATCTGGGTTTGACAAGAAGTTATTGTCATGGGACGTTCGTATGAAGAAGGCTTTTTCATTATCGAAAAGTCTAGATGCAGAGACGGACACCATGTCTGTCTCTGGGTTTTTGGTTACTGTAGGCATTGGAGCATCTGTCCATGTTTATGATTTACGTAACTTCGACAAACCAATTCTATCAATGGAGCCTTGCAATGGCACCCGATTGAGATGTGTCAGTTCAATTCCTTATGCAGAAGGATTTGCAGTTGGATCAGTGGATGGACGGGTTGCATTGCAGGTTTCCAATTCATCCAATTCAAATGACATTGGATATACATTCCGGTGTCATCCAAGATCAAAAGATGGTCAGCATCATTTGGCATCAGTGAACGACATTGCGTTCAGTCCACTTGTGTCTGGTGCTTTTGTCACTGGTGATGATGAAGGTTATGCTACCATATGGGATGCTAGAAGTAGGAAAAGGCTAGTTGAGTTTCCCAGGTACTCAAATAGTGTTGCATCCTTATCTTATAACCATTCGGGACAACTTCTAGCTGTAGCATCAAGTTATACTTACCAAGAAGCAAAAGAAATAGAAGAGCCTCCACAAGTGTTTATCCATGAAGTGGACAACATTGATATCGGATCAAGTTCTGCTCGGAGGAAACGTTAA 1002 0.4212 MNANSTQSKKLEIPINDAVSRIRFASHSNNLLISSWDSNLRLYDFDASVLRLEAPSQASLLDCCFQDDNDSVAFTAASDGFIRRYDLHSGIIDPVGSHDDMATCIGYSNETCLLITSGFDKKLLSWDVRMKKAFSLSKSLDAETDTMSVSGFLVTVGIGASVHVYDLRNFDKPILSMEPCNGTRLRCVSSIPYAEGFAVGSVDGRVALQVSNSSNSNDIGYTFRCHPRSKDGQHHLASVNDIAFSPLVSGAFVTGDDEGYATIWDARSRKRLVEFPRYSNSVASLSYNHSGQLLAVASSYTYQEAKEIEEPPQVFIHEVDNIDIGSSSARRKR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00791 333 Gene3D - 1 329 IPR015943 GO:0005515
Car02g00791 333 ProSiteProfiles Trp-Asp (WD) repeats profile. 95 136 IPR001680 GO:0005515
Car02g00791 333 ProSiteProfiles Trp-Asp (WD) repeats profile. 232 274 IPR001680 GO:0005515
Car02g00791 333 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 6 324 - -
Car02g00791 333 PANTHER MRNA EXPORT FACTOR AND BUB3 6 324 - -
Car02g00791 333 SMART WD40_4 216 265 IPR001680 GO:0005515
Car02g00791 333 SMART WD40_4 6 44 IPR001680 GO:0005515
Car02g00791 333 SMART WD40_4 45 86 IPR001680 GO:0005515
Car02g00791 333 SMART WD40_4 88 127 IPR001680 GO:0005515
Car02g00791 333 ProSitePatterns Trp-Asp (WD) repeats signature. 114 128 IPR019775 -
Car02g00791 333 SUPERFAMILY WD40 repeat-like 15 299 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00791 Car-Chr2 11342850 11347850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00791 97 299 Miscellaneous Gene Families AT5G08390 25.118 7.77e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00791 K02180 - gmx:100798072 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00791 02 11342850 11347850 Car02g00791 02 11342850 11347850 ECH