Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00728 ATGGGCACTTCTGGCAACAATTTTCTCCAAGTCGTCGCAAAAAACTTCGATGTTCTTGCTTTGCCCTTGGTTACCCTTGTTTATCCTTTATATGCTTCAGTAAAGGCCATAGAGACGAGGTCTAGTATTGATGACCAACAATGGCTCACATATTGGGTTCTCTACTCTTTGATCACACTCTTCGAACTCACATTTGCCAAACTTCTTGAACTGCTTGCAATTTGGCCTTATGCCAAGTTGATACTAAGTTGTTGGTTGGTCCTTCCTCACTTCAATGGAGCAGCACATGTTTATAGACACTATGTTAGACCATTCTACATGAATCCTCAAATGCCACAAATGCCACAAATGCCAGGAACTTCTCAAATGTGTCAAATGTGGTATGTTCCACGGAAGAAGAACATATTTAATAAGGAAGATGATGTTCTAACAGCTGCAGAGAGATATATGCAACAACACGGAACAGAAGCATTTGAAAGACTCATAAGCAAGGTACACAAATATATCACCTAA 513 0.3996 MGTSGNNFLQVVAKNFDVLALPLVTLVYPLYASVKAIETRSSIDDQQWLTYWVLYSLITLFELTFAKLLELLAIWPYAKLILSCWLVLPHFNGAAHVYRHYVRPFYMNPQMPQMPQMPGTSQMCQMWYVPRKKNIFNKEDDVLTAAERYMQQHGTEAFERLISKVHKYIT 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00728 170 PANTHER HVA22-LIKE PROTEIN 4 166 - -
Car02g00728 170 Pfam TB2/DP1, HVA22 family 29 105 IPR004345 -
Car02g00728 170 PANTHER HVA22-LIKE PROTEINS 4 166 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00728 Car-Chr2 9818286 9821876 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00728 K17279 - gmx:100306464 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00728 02 9818286 9821876 Car02g00728 02 9818286 9821876 ECH
Car02g00728 02 9818286 9821876 Car07g00955 07 8426053 8428348 PCT