Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00725 ATGTTAGAGGGTCGTTCGTGTGTTGTTCCGAGGTTGTTTTGTAGCACTTGTGAAGGAGAGAACGATTGGTCTTACATGAAGTACATGTTGGATTTGGACATCAAAAATGGCAAGAGACCAATGGAAATTGATTCTGAGGATGAACAGCATCCTAAGAAATGTACCAAGATGTTGGATTCTTGTCACATAGTTGAATCAGTTCGGATTTCGTTACAACAGCCTAAGGATTCCATTGAAGCCTTGAATGTTTGTCAAGGAGTTCATGATGGTGGAGATTGGAATCACCAGCTTGATGGTGATTCAATGGAGTTTGGTGAGCATCAAAATGCTTCAAATTTATTGATTCGAAGCGATGAGCAGCAAGAGAATCATGCTGGTGATTCGTCGGATTCTGGCTCACTTTTACCTCGGATGAATCGAGACAGCTCGATTGCGTGTCTAAGCCGCTGTTCGAGGTCAGACTATGGTTCGCTTGCTTCATTGAATAGGAGTTTCCGGAACATAATTCAAAGCGGCGAGCTCTATACATGGAGGAGACTAAATGGTATTATGGAACATTGGGTTTATTTCTCATGTGCCCTTCTTGAATGGGAAGCGTACGATCCGATTCGCCAAAGGTGGATGCATTTGCCAAGGATGGCTTCTAATGAATGCTTCATGTGTTCTGATAAGGAATCATTAGCTGTAGGAACAGAACTTCTTGTGTTTGGAAGGGAGCTCCGATCTCATGTCATTTATCGATATAGTCTTTTGACCAACTCATGGACCTCAGGAATGAGAATGAATGCTCCGAGATGTTTGTTCGGCTCTGCCAGCCTCGGAGAGATTGCGATATTAGCAGGTGGCTGTGATTCAGAGGGACGTATCCTCGACTCTGCCGAACTATATAATTCAGAGACTCAAACATGGGAACTACTCCCGAGTATGAAAAAACCAAGGAAAATGTGTTCTGGGGTATTCATGGACGGAAAGTTTTATGTTATAGGCGGGATCGGCGGCCGCGATTCCAAGCTTCTAACATGCGGCGAGGAGTACAATTTACAAACTAGAACATGGACGGAAATTCCTAACATGTCACCCGGACGAAGCAGTAGGGGGTCTGAGATGCCTGCAACTGCCGAGGCACCACCTCTTGTTGCTGTTGTAAATAATGAATTATACGCCGCTGATTATGCTGACATGGAAGTTAAAAAGTATGACAAGGAAAGAAAGTTGTGGATTACAATTGGGAGACTTCCGGAACGCGCGGTGTCGATGAACGGTTGGGGACTTGCATTTAGGGCATGTGGAAATAGGCTTATTGTCATTGGTGGACCTAGGACTCACGGCGAGGGTTTCATTGAACTCAATTCCTGGGTGCCTAGTGAAGGACCTCCGCAATGGCGATTACTAGATCGAAAACGATCGGGTAACTTTGTCTATAATTGTGCTGTGATGGGTTGCTGA 1446 0.4481 MLEGRSCVVPRLFCSTCEGENDWSYMKYMLDLDIKNGKRPMEIDSEDEQHPKKCTKMLDSCHIVESVRISLQQPKDSIEALNVCQGVHDGGDWNHQLDGDSMEFGEHQNASNLLIRSDEQQENHAGDSSDSGSLLPRMNRDSSIACLSRCSRSDYGSLASLNRSFRNIIQSGELYTWRRLNGIMEHWVYFSCALLEWEAYDPIRQRWMHLPRMASNECFMCSDKESLAVGTELLVFGRELRSHVIYRYSLLTNSWTSGMRMNAPRCLFGSASLGEIAILAGGCDSEGRILDSAELYNSETQTWELLPSMKKPRKMCSGVFMDGKFYVIGGIGGRDSKLLTCGEEYNLQTRTWTEIPNMSPGRSSRGSEMPATAEAPPLVAVVNNELYAADYADMEVKKYDKERKLWITIGRLPERAVSMNGWGLAFRACGNRLIVIGGPRTHGEGFIELNSWVPSEGPPQWRLLDRKRSGNFVYNCAVMGC 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00725 481 SMART kelc_smart 232 275 IPR006652 GO:0005515
Car02g00725 481 SMART kelc_smart 276 323 IPR006652 GO:0005515
Car02g00725 481 SMART kelc_smart 324 372 IPR006652 GO:0005515
Car02g00725 481 Gene3D - 179 471 IPR015915 GO:0005515
Car02g00725 481 Pfam Kelch motif 264 309 IPR006652 GO:0005515
Car02g00725 481 Pfam Kelch motif 312 359 IPR006652 GO:0005515
Car02g00725 481 SUPERFAMILY Kelch motif 194 478 IPR015915 GO:0005515
Car02g00725 481 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 1 481 - -
Car02g00725 481 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP11 1 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00725 Car-Chr2 9731241 9734074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g00725 141 357 EF-hand Containing Proteins AT4G39560 26.147 9.20e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00725 - - gmx:100818865 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00725 02 9731241 9734074 Car02g00725 02 9731241 9734074 ECH
Car02g00725 02 9731241 9734074 Car07g00958 07 8447969 8449054 PCT