Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00677 ATGGAAGGAACGATCAAATTAGACGGTTGTGGGTACGAGGTTACAACTTCATCTCACCTCTGCGTTTCAGTCATTAACTCCTACTACCATCAGGTTCTGAGCTACGGTAGAGAGAGATGTGTGATTCTGGAAGCAGTGGTCCATGATAACTACTGTGTATTAGCCAACACCTTAGTAGCTCATTTTCTCTACTCCTCCGATTCTTCTAAAGCTGCTTCTTATCTTCATACGGCTAAGTCCCACCTCGAACATGCCACGTTGTACGAGAAACTAGTTTTTGATGTCATCAGTTATTTAATGTCAGGAGATAGAGACGATGAAGTATCTGTTGAGTTGCATTCTAAGCTTCTGAAGGAGTTCCCAAGAGATTTGGTTTCTCTAAAGAGAGCACAAATCTTGTGCTTCTACATGGGTCGGCCTGATCTTTCTTTATCCCTTGTTAATAAGGTTCTACCTCAAAACGAAGGAGAAAATTACATATATGGCATGCTTGCTTTTCCTTTGTTGGAGCTTGGAAAAATGAAAGATGCTGAGAAAGCTGCCAAAAGAGGATTTGAAATCAACAAGAAAGATGGCTGGTCACAGCATGCTTTATGCCATGTTCTTCAATACGAGTGCCGTTTTAGAGAAGCTGTTAAGTTCATGGAAGAATGTGCATCATCATGGAATTCTTCTTCATCTTTCATGTTGACACACAATTGGTGGCATGTTGCACTTTGTTTCTTAGAAGGCAATGCTCCAATGCAAAGAGTGCTCGACGTATATGACAATTATATATGGAAGGAGTTAGAAAAACCCGATGCTGCAGTTCCTGAGGTTTACTTAAATGCCGTGGCTCTGCTTCTGCGGTTGTGTGTACGCGATGAATTGAACTTCTTGGGCGATCGGCTCAAGATGCTTGCAGATCGCCTAGCTGATCAAGCAAACTGGTATTTAGAGTGGCACCTTGATGTATTGACAGTTTGGGCTTTGGCAAAGACTGGACAAATTTCTAAGGCAGAAGATCTTCTCAAGGGCTTAAAAGACAGGCTTTCAAGGATGAATAAAAAGAAGCAACAAATAATGCAGAAAGGAATGATGCTTGCAGAAGCACTATATGCATATGAAAGAGGTAACTATAAACACGGATTGGAGTTACTTGGTCCAGATTTTGATGCCAGTGAATGCAAGGTAATTGGTGCATCTGATGAACAAGTTGATGTATTCAATGAAGTTTGGTACATCATGTTGCTGAACAGCGGAGACGTAACCAAGGCAATTGAAGTGATTGAGAAGCGAATCAAGAAGAGAGACGGCACTGCTTTCTTATGGCTTTTGTTGGAGAGAGGATACAAACTAGCAAAGAGACCAGAAGAAGCTGGAATTGCAAATGAGAAGGCCAAGGTTTTGGAGAGTGCTTATTTTTAA 1407 0.4136 MEGTIKLDGCGYEVTTSSHLCVSVINSYYHQVLSYGRERCVILEAVVHDNYCVLANTLVAHFLYSSDSSKAASYLHTAKSHLEHATLYEKLVFDVISYLMSGDRDDEVSVELHSKLLKEFPRDLVSLKRAQILCFYMGRPDLSLSLVNKVLPQNEGENYIYGMLAFPLLELGKMKDAEKAAKRGFEINKKDGWSQHALCHVLQYECRFREAVKFMEECASSWNSSSSFMLTHNWWHVALCFLEGNAPMQRVLDVYDNYIWKELEKPDAAVPEVYLNAVALLLRLCVRDELNFLGDRLKMLADRLADQANWYLEWHLDVLTVWALAKTGQISKAEDLLKGLKDRLSRMNKKKQQIMQKGMMLAEALYAYERGNYKHGLELLGPDFDASECKVIGASDEQVDVFNEVWYIMLLNSGDVTKAIEVIEKRIKKRDGTAFLWLLLERGYKLAKRPEEAGIANEKAKVLESAYF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00677 468 Coils Coil 330 357 - -
Car02g00677 468 CDD StaR_like 48 407 IPR033891 -
Car02g00677 468 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 38 8 467 IPR033891 -
Car02g00677 468 Gene3D Tetratricopeptide repeat domain 28 463 IPR011990 GO:0005515
Car02g00677 468 SUPERFAMILY TPR-like 112 461 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00677 - - lja:Lj2g3v1349460.1 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00677 02 8743516 8749336 Car02g00677 02 8743516 8749336 ECH