Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00650 ATGTCCATCACCAACAATCAACTTATCCTCTCATCATCCCTCCAATCTCGATACCATCATTCTTTCTCACTCCTCCCAACTCCAACCGCTTTCTCACTCCTCCCAACTCCAACCGCTTTCTCATTCTCTCTCCTTCGCTATAACTCCCTCTCTTACTCCCTTAAATTCCCTCTCTCTTTTTCCTTCAAAACCCCAACCTCAACTATTCGCGCCTTCgacgacgacgaagaagaagacgaagacgacgacgaagatgatgatgaagacgaagacgTTGCGGCTGATGAATACGACGACGTCGTTTCCGGTGAGGTTTCCGACGAAGTGGAAGCGTTTGAAATCGATGAATTGGCTTTACGCGATGACGGATTCAAGTGGCAGAGAGTTGAGAAGCTTTGTAATGAAGTTAGAGAGTTCGGTTCTGGAATTATTGATGTTGATGAACTCGCTTCTGTTTACGATTTCCGAATCGATAAATTTCAGCGGCAAGCGATTCAAGCTTTTCTGAGAGGTTCGTCGGTTGTGGTTTCAGCCCCGACGAGTAGCGGGAAGACTTTGATTGCGGAAGCTGCGGCGATTGCGACTGTGGCTAAAGGGCGGAGAAtattctacacgactcctctcaaagcgttgtctaatcagaagtttcgcgagttcCGGGAGACTTTTGGGGACAGTAATGTTGGCCTTCTTACAGGTGATTCTGCCGTCAACAAGGATGCTCAGGTTTTGATTATGACTACGGAGATATTACGTAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGAAGTGGACTTGTCAATGTTGATGTAATTGTTTTGGATGAAGTACATTACCTTAGTGACATATCTCGCGGTACAGTTTGGGAAGAAATTGTTATTTATTGCCCAAAAGAAGTTCAACTTAtttctctctcagcaactgttgcaaatccagatgagttggctggttggattggtcagATTCATGGTGGAACAGAGTTGGTAACATCATCGAAACGCCCAGTTCCTCTGACTTGGCATTTCTCTATGAAGAACTCCTTATTACCACTTCTTGACGAGAAAGGAACACAGATGAACAGGAAGCTGTCACTCAACTATTTACAACTTCAAGCTGCAGGTGTTAAACCTTATAAAGATGATTTTAGAAGAAGGAATTCCCGGAAACGTGGAACTCGCACAAGCTATGATATTGATGATAGCATGTTGGAACAACGTTCTCTTTCAAAGAATGACATAAATGCAATTCGTCGATCACAAGTTCCTCAAATAATTGATACGTTATGGCACCTTCAGTCTAGGGATATGCTACCAGCTATTTGGTTTATTTTTAGCAGGAAAGGTTGTGATGCAGCTGTTCAATATGTTGAAGATTGCAAACTTTTAGACGAGTGTGAAACAAAAGAGGTTGAACTAGCCTTGAAGAGGTTTCACATTCAATATCCTGATGCTGTCAGAGAAACAGCTGTGAAAGGACTTTTGCAAGGGGTTGCTGCCCATCATGCTGGATGTCTACCTTTGTGGAAGGCCTTCATAGAAGAATTGTTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACTGAAACCCTGGCTGCTGGAATGAATATGCCTGCTAGAACAGCTGTTATTTCATCCCTCAGCAAAAGAAGTGACACTGGGCGCACGCTATTGACCTCAAATGAACTGCTTCAGATGGCTGGCCGTGCTGGACGTAGAGGCATTGATGAGAGTGGTCATGTAGTCCTCGTCCAAACTCCTAATGAAGGCGCTGAAGAGTGCTGCAAGGTACTTTTTGCTGGACTTGAGCCACTGGTTTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGGTGGTGCGAAAGCCATTCATAGGTCAAACGCATCAGATGAGATGAAACCTTCCTCAGGGAAAACTTTGGAAGAAGCTAGGAAGTTAATTGAACAAAGTTTTGGAAATTATGTTAGTAGCAGTGTTATGCTGGCTGCTAAAGATGAACTTAATAAAATTGAAAAAGAAATTGAGTTGCTGATGTCAGAAATCACTGATGAAGCCATAGATAGAAAAAGTAGGAAGGCTTTATCACAGCGACAATACAAGGAGATTGCAGAATTACAGGAAGATTTAAGGGCAGAGAAACGCGTTCGAACTGAATTGAGAAAACAGAAGGAAGCAAAGAGAATATCTGCCTTGAAACCTTTATTGGAAGTGTCCGAAAATGGACATTTACCATTTTTGTGCTTGCAGTATAGAGATTCTGAAGGAGTCAACTCCCTTAGTGCTTCAAAACTCAAAAACATGATCGGTTCTATCGATTCTTTGTCATCAAAAAGTACTGATTCTGAATTGAACGAAGATCATGTACCATCATATCACGTAGCTCTTGGCTCAGATAACTCTTGGTATCTATTTACAGAAAAGTGGATTAAAACAGTATATGAGACAGGTTTTCCCGATGTTCCATTAGTTGAAGGAGATGCCCGACCTCGAGAAATTATGAGTGATCTTCTTGATAAGGAGGACATGAAGTGGGATAACCTTGCGCACTCTGAACACGGTGGTTTATGGTTCACGGAAGGATCTCTGGAAACATGGTCCTGGAGCTTGAACGTTCCTGTTTTGAGTAGCTTCTCTGAGAATGACGAGCTGCAACTGAACTCTCAAGCATTTAGAGATTCCACTGAACAATACAGGGACCAAAGAAATAAAGTTGCACGCTTGAAAAAGCAGATATCTCGTACCGAAGGCTATAAAGAATATAATAAAATCCTAGACACGGTCAAATTTATCGAGGAGAGAATCAAGCGACTGAAGACAAGATCCAAGCGTTTGATTAATCGGATTGAACAAATAGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTTAGCAACGTCATACGAGAAACCAGAGCTTTAGATATTAATACACATGTCATATTTCCATTGGGGGAAACCGCCTCAGCAATTCGTGGAGAAAATGAGCTATGGCTTGCGATGGTTCTTCGTAGTAAAATCTTACTAGAACTAAAACCTGCACAACTTGCTGCAGTGTGTGCAGGTTTGGTTTCTGAGGGTATCAAAGTCAGACCCTGGAAAAATAACAATTACATTTATGAGCCTTCTGCAACTGTAGTCAATGTCATAACACTATTGGATGAGCAAAGAAGTGCCCTGCTGGAAATTCAGGAGAAACATGGGGTTACAATATCTTGCTTTTTGGATACCCAGTTTTGTGGTATGGTTGAAGCTTGGGCTTCTGGGTTGACATGGAGAGAAATAATGATGGATTGTGCAATGGATGATGGTGATCTAGCTCGTCTCCTTCGACGCACCATTGATCTATTAGCTCAGATTCCTAAATTGCCAGATATTGATCCGTTGTTGCAGCGGAATGCAAGGGCTGCTTCTGATGTCATGGACCGGCCTCCAATAAGTGAACTTGCTGGGTAG 3462 0.4018 MSITNNQLILSSSLQSRYHHSFSLLPTPTAFSLLPTPTAFSFSLLRYNSLSYSLKFPLSFSFKTPTSTIRAFDDDEEEDEDDDEDDDEDEDVAADEYDDVVSGEVSDEVEAFEIDELALRDDGFKWQRVEKLCNEVREFGSGIIDVDELASVYDFRIDKFQRQAIQAFLRGSSVVVSAPTSSGKTLIAEAAAIATVAKGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLISLSATVANPDELAGWIGQIHGGTELVTSSKRPVPLTWHFSMKNSLLPLLDEKGTQMNRKLSLNYLQLQAAGVKPYKDDFRRRNSRKRGTRTSYDIDDSMLEQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDMLPAIWFIFSRKGCDAAVQYVEDCKLLDECETKEVELALKRFHIQYPDAVRETAVKGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGMNMPARTAVISSLSKRSDTGRTLLTSNELLQMAGRAGRRGIDESGHVVLVQTPNEGAEECCKVLFAGLEPLVSQFTASYGMVLNLLGGAKAIHRSNASDEMKPSSGKTLEEARKLIEQSFGNYVSSSVMLAAKDELNKIEKEIELLMSEITDEAIDRKSRKALSQRQYKEIAELQEDLRAEKRVRTELRKQKEAKRISALKPLLEVSENGHLPFLCLQYRDSEGVNSLSASKLKNMIGSIDSLSSKSTDSELNEDHVPSYHVALGSDNSWYLFTEKWIKTVYETGFPDVPLVEGDARPREIMSDLLDKEDMKWDNLAHSEHGGLWFTEGSLETWSWSLNVPVLSSFSENDELQLNSQAFRDSTEQYRDQRNKVARLKKQISRTEGYKEYNKILDTVKFIEERIKRLKTRSKRLINRIEQIEPSGWKEFMQVSNVIRETRALDINTHVIFPLGETASAIRGENELWLAMVLRSKILLELKPAQLAAVCAGLVSEGIKVRPWKNNNYIYEPSATVVNVITLLDEQRSALLEIQEKHGVTISCFLDTQFCGMVEAWASGLTWREIMMDCAMDDGDLARLLRRTIDLLAQIPKLPDIDPLLQRNARAASDVMDRPPISELAG 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00650 1153 SMART helicmild6 489 575 IPR001650 -
Car02g00650 1153 Coils Coil 664 691 - -
Car02g00650 1153 Coils Coil 894 914 - -
Car02g00650 1153 SMART ultradead3 153 343 IPR014001 -
Car02g00650 1153 Gene3D - 337 606 IPR027417 -
Car02g00650 1153 Coils Coil 699 726 - -
Car02g00650 1153 Gene3D - 118 336 IPR027417 -
Car02g00650 1153 Pfam DEAD/DEAH box helicase 160 312 IPR011545 GO:0003676|GO:0005524
Car02g00650 1153 MobiDBLite consensus disorder prediction 71 99 - -
Car02g00650 1153 Pfam DSHCT (NUC185) domain 982 1148 IPR012961 -
Car02g00650 1153 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 165 329 IPR014001 -
Car02g00650 1153 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 59 1149 - -
Car02g00650 1153 CDD SF2_C_Ski2 405 587 - -
Car02g00650 1153 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 422 621 IPR001650 -
Car02g00650 1153 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 59 1149 - -
Car02g00650 1153 Gene3D - 923 1145 - -
Car02g00650 1153 MobiDBLite consensus disorder prediction 72 99 - -
Car02g00650 1153 SMART DSHCT_2 978 1152 IPR012961 -
Car02g00650 1153 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 589 IPR027417 -
Car02g00650 1153 Coils Coil 924 951 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00650 Car-Chr2 8318244 8326115 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00650 K26077 - gmx:100780908 1756.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00650 02 8318244 8326115 Car02g00650 02 8318244 8326115 ECH