Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00642 ATGGAGTGTGCGGCGAAGGGTACCGGAACACGATGTAACAGCGCCGCGACGAGACTCTGTACTCGTTGCGAAGCAGTTGCTTATTGCTCTTTGTCTCACCAGATTAAGCATTGGAGTCGTCACAAACTCGAGTGTGATAGGTTACAGCAACAGATGGAGTGTGTAGATCTTCTTAATGATTTTCCTTTCACTTTCTCTTGCGAAGCCACATTTCAGGTTTGTGCAAAACAAGAAACTAGGTGTTCATTTTTTAGCAAGAGAGGCCTTCATAGAGTTGGAATGTGGATGCATGAATGCCATTGTGGAGCATCATCTGCTTCATTTGATCTTTTAGGGCTAAACAATGGCTGGGACCTCTCGAGTGTTTTGTGTCCTTGTCACGGTCCTGAGTTTCTGTTATCAGAGCAGTTGTGTAGTTGGAGAGACTACTATAAGTGGAGGCGCATCCCGCTAGACTCACCGGTTGCTTTGCTTCTTCACTGGCCACTTACAATATATCGTGCTGCTCAACTTGTTGGAATTACAACCTCGAATCTTGTAGTCGGTGATAAGTTGTACATACATTACCTTGGACCTGAGAAGGAGCTGCTACAACTTGCTGTGTTTGGAGATTTACTTGCCCTCTTCCCTGGTGTACATATTCATATAGAACTTGTTGGACCTGCAATTCCCCCTCAAAGGGATGGCGAAAAGATCATCATTTCTAAGTATCCTTGTTGCAATGAAGAGAAGTGTGTGTGCAAACTAGCGAGTGAAAATGCGATCTTAGGAACACAAACAGGTTTGACTTCTGCGTTGACATTGCAGCTTTGGCGAGGATTCTATCATGACAGATACAGAGACGTTGTTAAGGATTCCTTTCCTCACCTAGTGATTGCTCCAAATGGTGGCATTGCTGCCTATTCCAGTTGGTTACCAAGTATTGAGTTAATTAAAAAGATCGATGTCCCAGCTGTTTTTACCGATTATTGCGAGGAAGCTTGTCATCTTGCAGCAGGTTGCATAAAGACTGTAACTGGACGCCCCCTTAGATTACCTGTTCAATTAAATCCTTTCAGGCAGCCTATTGCCGTAGAAGACAGTGTGTTGTTGCTTCCCTGCTACTCAAACTGCTTTCTTTTTGACATAATCTTATTGATTGATCTACTAGTCATGGTGGTGACACTTTTAAAGTATTCTTCCAAAAAGCAACGTATGAGCTGGTTGTTGGCGCAGTATTACTCTAAGCAAGCTTCTTTCTTTAACGAAACAAATGGCTCAGTTGCCATCGTGAAGAGCGAGTTTCCTTCAAAAATTATCAATGTTCCTTTCAGAGTCAACGATGTGTTACCCGTTCTTCCCCATGGAATTTCGTGGCCTGTACTCAACAATTTTCATACTGCCGTTGATTTGTTACCTTCTTTTGTTGGATCCGTGACTCCTTATAATGGTTCTATTGAATGGAAAGGTGCTTGCTTTTATGATAATCAAGCCAAACTTGAGTTCACTGCTGGAGACGCAGATGCTTCCGCCTTGGGTGGGGCCATTCTCTATCTCAAGACAGGGGAGGCACACAGCTGGACCTGCATGGATCTGTATGTTTTTGCTACGCCATACAGGATAACTTGGGACTACTACTTCTCTGCACGAGAACATACCTTGAAGCTTGATTCGTGGGAAGAGCCTGCAGAGTTGGAATATGTATTTTTCTTGTGCAGTTTTCTGTTTTGGTTGTATTTTTGTGTGGTTGATGTGTTGCCTCTATTTTCTAACACTGCATGGGGTCAGAGTGCCAATTTGGATTTCCTAAAGAAGCACATGGGAGCTACGTTTGAGAAACGCGTTCAGCCTTGGCGTGCAACTATTGATCCCGCAGATGTTCATTCTGGAGATTTTTTGGCTGTGTCAAAAATCCGCGGTAGGTGGGGAGGTTTTGAGACACTTGAAAAGTGGGTAACTGGTGCATTTGCTGGTCATACAGCAGTTTGCTTGAAAGATGAAATGGGAAATTTGTGGGTTGGTGAATCTGGGCATGAGAATGAAAAGGGTGAAGAAATAATAGTGGTAATTCCATGGCATGAATGGTGGGAATCTGCTCTTAAAGACGATTCCAATCCGCAGATAGTGTTGCTTCCCCTGCATCCGAAGTTGCGTTCAAAGTTCAACTTAACTGCAGCATGGGAGTATGCACGGAGCATGTCTGGCAAGCCATATGGTTATCACAATATGATATTCAGTTGGATTGACACAGTAGCTGACAACTATCCTCCACCTCTTGATGCTCACTTGGTAATTTCTGTCATGTCTATGTGGACAAGGATGCAGCCATCTTATGCTGCAAACATGTGGAACGAAGCGCTGAATAAGCGCTTAGGGACAGAGGATTTAGATTTGCATGACATTCTACTCGAGACTGAGAAGCGTGGGATAGCTTTTGATGAATTACTTGCCATTCCAGAACAAGATGAATGGGTATACAGTGATGGCAAGTCAACAACATGCGTCGCATTTATTCTTTCAATGTATAAAGAGGCTGGCATTTTTGGTCCTGTTACTAGCTCCATTCAAGTAACTGAATTCACAATTCGTGATGCATACATGCTTAGGATTTTTGAAGATAATCAAACACGTCTACCGAGATGGTGCAACAATGCGAATGACAAGCTTCCATTCTGCCAGATTCTCGGTGAATATAGGATGGAATTGCCAGGCTATAACACCTTGGATCCTTATGCCAATATGAATGAGCACTGTCCTTCCCTTCCTCCAACTTATGATAGGCCTTCTAAATGTTAG 2775 0.4335 MECAAKGTGTRCNSAATRLCTRCEAVAYCSLSHQIKHWSRHKLECDRLQQQMECVDLLNDFPFTFSCEATFQVCAKQETRCSFFSKRGLHRVGMWMHECHCGASSASFDLLGLNNGWDLSSVLCPCHGPEFLLSEQLCSWRDYYKWRRIPLDSPVALLLHWPLTIYRAAQLVGITTSNLVVGDKLYIHYLGPEKELLQLAVFGDLLALFPGVHIHIELVGPAIPPQRDGEKIIISKYPCCNEEKCVCKLASENAILGTQTGLTSALTLQLWRGFYHDRYRDVVKDSFPHLVIAPNGGIAAYSSWLPSIELIKKIDVPAVFTDYCEEACHLAAGCIKTVTGRPLRLPVQLNPFRQPIAVEDSVLLLPCYSNCFLFDIILLIDLLVMVVTLLKYSSKKQRMSWLLAQYYSKQASFFNETNGSVAIVKSEFPSKIINVPFRVNDVLPVLPHGISWPVLNNFHTAVDLLPSFVGSVTPYNGSIEWKGACFYDNQAKLEFTAGDADASALGGAILYLKTGEAHSWTCMDLYVFATPYRITWDYYFSAREHTLKLDSWEEPAELEYVFFLCSFLFWLYFCVVDVLPLFSNTAWGQSANLDFLKKHMGATFEKRVQPWRATIDPADVHSGDFLAVSKIRGRWGGFETLEKWVTGAFAGHTAVCLKDEMGNLWVGESGHENEKGEEIIVVIPWHEWWESALKDDSNPQIVLLPLHPKLRSKFNLTAAWEYARSMSGKPYGYHNMIFSWIDTVADNYPPPLDAHLVISVMSMWTRMQPSYAANMWNEALNKRLGTEDLDLHDILLETEKRGIAFDELLAIPEQDEWVYSDGKSTTCVAFILSMYKEAGIFGPVTSSIQVTEFTIRDAYMLRIFEDNQTRLPRWCNNANDKLPFCQILGEYRMELPGYNTLDPYANMNEHCPSLPPTYDRPSKC 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00642 924 ProSiteProfiles Zinc finger MYND-type profile. 9 45 IPR002893 -
Car02g00642 924 PANTHER OS01G0793500 PROTEIN 427 924 - -
Car02g00642 924 Pfam MYND finger 11 45 IPR002893 -
Car02g00642 924 PANTHER ZINC FINGER MYND DOMAIN PROTEIN 427 924 - -
Car02g00642 924 Pfam MSS51 C-terminal domain 162 360 IPR046824 -
Car02g00642 924 Gene3D - 4 47 - -
Car02g00642 924 SUPERFAMILY HIT/MYND zinc finger-like 11 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00642 Car-Chr2 8218760 8228102 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00642 - - gmx:100805887 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00642 02 8218760 8228102 Car02g00642 02 8218760 8228102 ECH