Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00640 ATGATGATATCATATCTAGTTGAATTTCTCTTAATCCTTCTCCTTATCATTGTCAATACAACCCTTTCAGCTTATATCCCTCAATTCTCTCCATCTTTTGGCAAACAAATAATGAAAGAAAATGCATCGAAAAAGTCATTAGACAAGAGCAAACAAGAGTCATCTCCTCCATTAGATTCACAATTATCACCGACAGAGAATCAAGACTTATCTCAAATAAAAAAATATTTGTCCGTATTCGGGTACCTCCAACAAAATGTAGAGTCGTTTGATGATGTTCTAGACAAAGAAACAATATCAGCTATCATAACCTACCAACAAAATTTCAATCTTAAAGTAACCGGCAACATAAACGACGAGTTTTTAGAACATATTGCATTTCCACGATGTGGTATCCCAGATATGAATCTCAACCACGGCCACGATACATTAAATGTATCGTGGCCGAATGGGAATAAATGGTTCCCTAAAGGAACGAAAAATCTTTCCTATTTTATTCCAGAGAGTGAATTCACATTGGAAGCAATGGCAGTGTTGAGAAATGCCTTATCACGATGGTCAAAGATCACAAAGGTAATGAATTTCACGGAGACACCGTACGATGATGCTGACATTAAGTTTGGATTTTATAATTCCAACGATAAAATTGAGGATGTTGTTGTTGGGTTCAGTTTGATAATTTTGCAACAAAGTTCAAAAAGAAAGTTAGGTGTGATAGGTTTTGACAATATAAGGGAGTGGGTGTTACCAAGTGAGTACCTTTGGTCGTGGAAATTTGATTTGGAGAGTGAGGCAATGCATCAAATAGGTCATCTGCTTGGACTTGATCACTCTTATGATGAGGAGTCTGTTATGTATCCTACCATATTGCCATCACAACAAAGGAGGGTGCAAATAACAGCTTCAGATAACCAAAATATTCAACAAATCTATACCCAATCCAACCCCACTTCTGCTCATATTAAGAGTTTTGGTTTCACTCGCTCCAGTTCCGTTCTTGCTTCGTCTTTCTTACTTGGATTTGTTTTCCTCTTTCTCTTCAACTAG 1047 0.3687 MMISYLVEFLLILLLIIVNTTLSAYIPQFSPSFGKQIMKENASKKSLDKSKQESSPPLDSQLSPTENQDLSQIKKYLSVFGYLQQNVESFDDVLDKETISAIITYQQNFNLKVTGNINDEFLEHIAFPRCGIPDMNLNHGHDTLNVSWPNGNKWFPKGTKNLSYFIPESEFTLEAMAVLRNALSRWSKITKVMNFTETPYDDADIKFGFYNSNDKIEDVVVGFSLIILQQSSKRKLGVIGFDNIREWVLPSEYLWSWKFDLESEAMHQIGHLLGLDHSYDEESVMYPTILPSQQRRVQITASDNQNIQQIYTQSNPTSAHIKSFGFTRSSSVLASSFLLGFVFLFLFN 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00640 348 PRINTS Matrixin signature 125 138 IPR021190 GO:0004222|GO:0006508|GO:0008270
Car02g00640 348 PRINTS Matrixin signature 179 194 IPR021190 GO:0004222|GO:0006508|GO:0008270
Car02g00640 348 PRINTS Matrixin signature 264 289 IPR021190 GO:0004222|GO:0006508|GO:0008270
Car02g00640 348 PRINTS Matrixin signature 299 312 IPR021190 GO:0004222|GO:0006508|GO:0008270
Car02g00640 348 Pfam Putative peptidoglycan binding domain 67 123 IPR002477 -
Car02g00640 348 SMART col_5 150 313 IPR006026 GO:0006508|GO:0008237|GO:0008270
Car02g00640 348 MobiDBLite consensus disorder prediction 53 67 - -
Car02g00640 348 PANTHER MATRIX METALLOPROTEINASE 65 314 - -
Car02g00640 348 Pfam Matrixin 161 311 IPR001818 GO:0004222|GO:0006508|GO:0008270|GO:0031012
Car02g00640 348 Gene3D Collagenase (Catalytic Domain) 60 318 IPR024079 GO:0008237
Car02g00640 348 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 168 311 - -
Car02g00640 348 MobiDBLite consensus disorder prediction 44 67 - -
Car02g00640 348 PANTHER MATRIXIN PROTEIN 65 314 - -
Car02g00640 348 SUPERFAMILY PGBD-like 65 135 IPR036365 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00640 Car-Chr2 8206825 8208053 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00640 - - cam:101514810 650.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00640 02 8206825 8208053 Car02g00640 02 8206825 8208053 ECH