Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00591 ATGATTCGTCCTGTATATCCTCCACGCCTTCCTGGAGCAATCAACGTACTTCCATTATCACGCCCACCTGTTGCAGGGATCCCCACAATTCGCCCTATTATTCCTCCTGTTATCAGACCCGTGGTTCCTCCTATTGTTACTCCATCTGAGAAGCAACATACAACCGTTTACATTGGCAAGATTGCACCAACTGTGGAAAATGAGTTCATGCTTTCTCTCCTCAAATTATGTGGGAATATCAAGAGCTGGAAACGACCTCAGGATCTATCAAGTGGAACTCCTAAAAGTTTTGGTTTTTTCGAGTTTGAGACTGCTGAAGGGGTTCTCCGTGCTTTACGTCTCCTTACGAAATTAAATGTTGATGGGCAAGAACTAATGATCAATGTAGATGAAGCTATGAGAAACTATCTGGAGAAGTATGTTCAAAGAAAAACTGAGAATTCAAAGGAAAAGGAAACTCAGGCAGCAGGAGGAGTTGAAAAAGATGAAGAAGTTGCAAAACCTTCTGATGTAAATGAGGATGCAAAGCCTGATCTGGAGCACTCAAAAAAGGAGGACAGTGATTCGGGGAACAAGAAATCCCACGATGTGGCAAGTTTTGGGATTGTTACTGATGAAGATAAGGAAATCGATCGAGATGCTTTAGAAAAGATCAAGAATATGATTGAGGAGAGGTTGAAGACAAGACCTTTGCCTCCACCACCTCCGCCGCCAACTGGTGATGGTTCTGTGAATTCAACTTCCGAACAACCGACTAAAACAAGAGAAGGGGATTCTGACGTGGATACAAAGAAGAATGAAATAGTTGAAGATAAAAATGAGAGAGAGACAAACAGTGATAACAAACCAACCACTGAACATGATAGACCTGAAACACCTGACAGAAGGCATGACAGGAAAAACagggagagagatcgagaaagggaactgaaaagagaaaaggaaagagaaCTTGAGAGATATGAAAGAGAAGCTGAGAGGGAACGTATTCGGAAGGAGAGGGAACAAAAACGAAGGATTGAAGAGGTTGAACGTCAGTTTGAAGTATATTTGAAGGAATGGGAGTATAGagaaagagagaaagagaaagaacgtcagtatgaaaaggagaaagagaaggaaagggaacgcaaacggagaaaggaaaTTCTTTATGATGAAGAGGATGACGACGGGGATTCTAGGAAGAGGTGGCGTAGAAATGCGATAGAGGAGAAGAGAAAGAAGAGGCAGAGAGAAAAGGAAGATGACCTGGCTGACAGACAAAAAGAAGAGGAGGAAATTGTCGAGGCCAAGAAGAGGGCCGAGGAGGATCAACAATTGATGCGTCAGAGAGATGCATTGAAGCTATTGTCAGAGCACATTGTAAATGGTGGTGACGAAACCATGGCTACCAAAGAGATCACTAATGAAATGAAGAATATTGTTGCTGTACAAGATACTATAGCTGATTATAGTCATGAAGGTGATGGTAATGTACTAAATACAATCAATGAAGAATCAGCCATGGCATCTGTAGCCACAACTGATACACAGTCAAGTGGAAATGCTCCTATGAAGAAGTTGGGATTTGGTCTGGTTGGCTCAGGAAAAAGGACAACTGTCCCTTCTGTTTTCCATGAAGATGAAGACGATGATGCACACAAGGATAAAAAATTGAGGCCTTTGGTTCCAATTGATTACTCAACAGAGGAATTGCAGGCTGTTGAACCTACTGCTTCTGGGCCAACACCACCCAATTTGGCTGCAGCTGCTGAGTTTGCAAAGCGTATATCCAGTACCAATTTCAAGGAAGAGAGGCTGGATGGAGAACGGGATAGAAGTAGGCATTCAAATGATAAGTCTAACCACCGGGACAGGGATCGGGGTGATGAAGATGGCACTCACCACAGAGATGAACACAGGGAGAAAAATTCTGACCGTGACAGGGATCGAGATCATGGGTCGGAGAAACACAAGACTTATGATAACAGGAGGCTCTTGGATGCAAAACAGTTAATTGATATGATACCAAAGACCAAGGAGGAGTTGTTCTCATATGAGATAGACTGGGCAGTGTATGACAAGCATCAATTACACGATAGAATGAGACCGTGGATTTCAAAGAAAATCAAAGAGTTTTTGGGGGAAGAAGAAAATACGTTGATAGACTATATTGTTTCAAGTACGCAAGAACATGTGAAAGCATCTCAAATGCTAGAGCGTCTTCAGATCATTTTAGATGAAGAGGCTGAAATGTTCGTTCTCAAGATGTGGAGGATGCTTATCTTTGAAATCAAGAAGGTTGAGACAGGGCTTGCTTTGAGGTCAAAATCATGA 2319 0.4015 MIRPVYPPRLPGAINVLPLSRPPVAGIPTIRPIIPPVIRPVVPPIVTPSEKQHTTVYIGKIAPTVENEFMLSLLKLCGNIKSWKRPQDLSSGTPKSFGFFEFETAEGVLRALRLLTKLNVDGQELMINVDEAMRNYLEKYVQRKTENSKEKETQAAGGVEKDEEVAKPSDVNEDAKPDLEHSKKEDSDSGNKKSHDVASFGIVTDEDKEIDRDALEKIKNMIEERLKTRPLPPPPPPPTGDGSVNSTSEQPTKTREGDSDVDTKKNEIVEDKNERETNSDNKPTTEHDRPETPDRRHDRKNRERDRERELKREKERELERYEREAERERIRKEREQKRRIEEVERQFEVYLKEWEYREREKEKERQYEKEKEKERERKRRKEILYDEEDDDGDSRKRWRRNAIEEKRKKRQREKEDDLADRQKEEEEIVEAKKRAEEDQQLMRQRDALKLLSEHIVNGGDETMATKEITNEMKNIVAVQDTIADYSHEGDGNVLNTINEESAMASVATTDTQSSGNAPMKKLGFGLVGSGKRTTVPSVFHEDEDDDAHKDKKLRPLVPIDYSTEELQAVEPTASGPTPPNLAAAAEFAKRISSTNFKEERLDGERDRSRHSNDKSNHRDRDRGDEDGTHHRDEHREKNSDRDRDRDHGSEKHKTYDNRRLLDAKQLIDMIPKTKEELFSYEIDWAVYDKHQLHDRMRPWISKKIKEFLGEEENTLIDYIVSSTQEHVKASQMLERLQIILDEEAEMFVLKMWRMLIFEIKKVETGLALRSKS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00591 772 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 56 125 IPR000504 GO:0003723
Car02g00591 772 Coils Coil 297 353 - -
Car02g00591 772 Gene3D PWI domain 650 767 - -
Car02g00591 772 ProSiteProfiles PWI domain profile. 675 772 IPR002483 GO:0006397
Car02g00591 772 Coils Coil 356 384 - -
Car02g00591 772 Coils Coil 414 441 - -
Car02g00591 772 MobiDBLite consensus disorder prediction 536 556 - -
Car02g00591 772 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 772 - -
Car02g00591 772 MobiDBLite consensus disorder prediction 253 335 - -
Car02g00591 772 MobiDBLite consensus disorder prediction 143 226 - -
Car02g00591 772 Gene3D - 46 163 IPR012677 -
Car02g00591 772 PANTHER SPLICING FACTOR PWI DOMAIN-CONTAINING PROTEIN / RNA RECOGNITION MOTIF (RRM)-CONTAINING PROTEIN 1 772 - -
Car02g00591 772 SUPERFAMILY RNA-binding domain, RBD 36 130 IPR035979 GO:0003676
Car02g00591 772 Pfam PWI domain 695 758 IPR002483 GO:0006397
Car02g00591 772 SUPERFAMILY PWI domain 693 760 IPR036483 GO:0006397
Car02g00591 772 MobiDBLite consensus disorder prediction 594 657 - -
Car02g00591 772 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 54 134 IPR000504 GO:0003723
Car02g00591 772 CDD RRM_RBM25 54 137 IPR034268 -
Car02g00591 772 MobiDBLite consensus disorder prediction 143 335 - -
Car02g00591 772 MobiDBLite consensus disorder prediction 358 432 - -
Car02g00591 772 SMART pwi_2 688 761 IPR002483 GO:0006397
Car02g00591 772 SMART rrm1_1 55 128 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00591 K12822 - gmx:100809428 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00591 02 7065055 7071956 Car02g00591 02 7065055 7071956 ECH