Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g00564 ATGGCAACAAATATTGTTCCAAGCACTGATCCAACTACTAATATTCCAACTCATACAAAAGCTTGGTTCTACTCTGAACATGGTAAACCAACAGATATTCTTAAATTGCATCCTAATTGGTCTATACCACAACTCAAAGATAATCAAGTCCTCATCAAAGTTGTAGCTGTTTCCCTTAATCCTGTTGATTACAAAAGGATGCATGCCTTGTTCAAAGACACCGACCCTCATCTACCTATTGTTCCAGGATTTGATGTTAGTGGCATAGTGGTGAAAGTGGGATTTAAAGTGGTGAAATTTAAGGTTGGAGATGAAGTATATGGTGACATCAATGAAGAAGGTCTTTCAAACTTAAAGATTCTTGGTACTTTGTCAGAGTATACTATTGCTGAAGAGAGATTATTAGCTCATAAGCCAAACAATCTAAGTTTCATTGAAGCTGCTAGCATTCCTTTAGCCATTGAGACTGCTTATGAAGGACTTGAGAGAGCTCAACTTTCACCTGGAAAATCTATCCTTGTTTTGGGAGGAGCTGGTGGAGTTGGAAGCTTTGCAATTCAGCTTGCTAAGCATGTGTATGGTGCATCTGAGATAGCTGCAACTTCTAGCACTGGAAAACTCCACCTTTTGAGGGAGTTGGGAGTTGACTTGCCTATTGATTACACAAAGGACAACTTTGAAGATCTTCCACAAAAGTTTGATGTAGTGTACGATACAGTAGGAGAAGTTGATAGGGCTATGAAGGCCATTAAGGAGGGTGGCAAAGTTGTGACAATAGTACCTCCTGGATTTCCACCAGCTCTATTTTTTGTGCTGACTTCTAAAGGATCTATCTTAGAGAAGTTAAGACCTTACTTTGAAAGTGGTCAATTGAAGCCAATTCTTGACCCAAAGACTCCAATACCATTTTCTGAGGTCATTGAAGCATATTCCTACTTGGAAACCTCAAGAGCCACTGGAAAAGTTGTCATTTATCCCATTCCTTGA 987 0.3941 MATNIVPSTDPTTNIPTHTKAWFYSEHGKPTDILKLHPNWSIPQLKDNQVLIKVVAVSLNPVDYKRMHALFKDTDPHLPIVPGFDVSGIVVKVGFKVVKFKVGDEVYGDINEEGLSNLKILGTLSEYTIAEERLLAHKPNNLSFIEAASIPLAIETAYEGLERAQLSPGKSILVLGGAGGVGSFAIQLAKHVYGASEIAATSSTGKLHLLRELGVDLPIDYTKDNFEDLPQKFDVVYDTVGEVDRAMKAIKEGGKVVTIVPPGFPPALFFVLTSKGSILEKLRPYFESGQLKPILDPKTPIPFSEVIEAYSYLETSRATGKVVIYPIP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g00564 328 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 169 190 IPR002364 GO:0008270|GO:0016491
Car02g00564 328 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 12 328 - -
Car02g00564 328 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 12 328 IPR044626 GO:0016628
Car02g00564 328 CDD MDR_like_2 20 324 - -
Car02g00564 328 Pfam Alcohol dehydrogenase GroES-like domain 48 109 IPR013154 -
Car02g00564 328 SUPERFAMILY GroES-like 19 178 IPR011032 -
Car02g00564 328 SMART PKS_ER_names_mod 29 324 IPR020843 GO:0016491
Car02g00564 328 Gene3D - 161 275 - -
Car02g00564 328 Pfam Zinc-binding dehydrogenase 213 324 - -
Car02g00564 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 142 293 IPR036291 -
Car02g00564 328 Gene3D - 26 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g00564 Car-Chr2 6770824 6774526 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g00564 K18980 - gmx:100788619 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g00564 02 6770824 6774526 Car02g00564 02 6770824 6774526 ECH