Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02865 ATGCTTGGTTTGGGTGCGGACCTATTGTTGGCCGACATGAATCGTCTCCTCTCATTTCTTTTCCATGAGGGGGTGTTGGACGAGCAATTTTTGCACCTTCATCAGCTTCAAGATCACACCTCCCCTAACTTCGTCTCTCAAGTCATCAACATTTATTTCCATGAGTCCGAGAAACTACTCAACAATCTCAGATCATTACTAACGGATAGAGAGTTATCGGACTATAAGAAAATTGAAATACATTTGAATCAGTTAATTGGTAGCAGCTCAAGCATTGGTGCTAAGAGAGTCACTACCGTTTGCATTGCGTTTCGTTCAGCTACTAACCGTGCTGGGTGCTTGCGAGCCTTGGAGATGCTTGAACATGAATATTGCTATCTTAAGAATAAATTGCATGAACTCTTTCAAATTGAGCAGCAACGTGCTTTGGCAGCAGGAGTGAGATATCCTATGCAGAATCAATAA 465 0.4215 MLGLGADLLLADMNRLLSFLFHEGVLDEQFLHLHQLQDHTSPNFVSQVINIYFHESEKLLNNLRSLLTDRELSDYKKIEIHLNQLIGSSSSIGAKRVTTVCIAFRSATNRAGCLRALEMLEHEYCYLKNKLHELFQIEQQRALAAGVRYPMQNQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02865 154 Gene3D HPT domain 4 153 IPR036641 GO:0000160
Car01g02865 154 PANTHER - 1 149 IPR045871 GO:0000160|GO:0009927|GO:0043424
Car01g02865 154 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 9 140 IPR036641 GO:0000160
Car01g02865 154 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 41 134 IPR008207 GO:0000160
Car01g02865 154 PANTHER PSEUDO HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 6 1 149 - -
Car01g02865 154 Pfam Hpt domain 48 126 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02865 Car-Chr1 53794840 53795498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02865 K14490 - gmx:100777831 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02865 01 53794840 53795498 Car01g02865 01 53794840 53795498 ECH
Car01g02865 01 53794840 53795498 Car06g02341 06 25229316 25231800 PCT