Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02864 ATGGCTTCTGACTCTGTCCCTGAAAAGATGAAAGATCGTTTAGTCGTAGAAGACGAATACATCTTCAAAGAAGAGATCCATTTCACAGTCCTCAAAACCTCTCTTTTCTTCTCCGGCGATGGTTTCGCCGTCTATGATTGTGACGGAGAAATTGTCTTCCGAGTTGACTCATATGGACCCAATAGTCGCGACCTTGACGAACTCGTTCTCATGGATACCGACGGCTGCTGCCTCCTCACCGTTCGTCGCAAGAGGCCGAGTTTGCATCAACGGTGGGAAGGCTTTAAAGGGGAAAAAATGGACGATGATAAACCAATCTTCAGCGTGAAGAGATCATCGATTATCGGACGGTCAAGTACGGGAGTAACGGTGGAGATGTACGATAGCCCTGGTGAGGACTACCATATTGAAGGGTGTTACTCGCAGCGTTGTTGTACGATTTTCAACATGAAGAAGGAATCGGTGGCTGAGATTCGTCGCAAGGTGGACCCCACCACGAGTGTTATGCTTGGGAAGGAAGTTTTCTCTCTTTGCATTAAGCCTGGTTTTGACGCGGCTTTTGCAATGGGATTCGTGCTCGTCCTTGATCAAATTAGCGGTGACGATTACTTTGATGATGATGTAACTGCGGAACCTACGGTGCACCCTGCTGCAGAAGATTAA 663 0.4766 MASDSVPEKMKDRLVVEDEYIFKEEIHFTVLKTSLFFSGDGFAVYDCDGEIVFRVDSYGPNSRDLDELVLMDTDGCCLLTVRRKRPSLHQRWEGFKGEKMDDDKPIFSVKRSSIIGRSSTGVTVEMYDSPGEDYHIEGCYSQRCCTIFNMKKESVAEIRRKVDPTTSVMLGKEVFSLCIKPGFDAAFAMGFVLVLDQISGDDYFDDDVTAEPTVHPAAED 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02864 220 SUPERFAMILY Tubby C-terminal domain-like 14 198 IPR025659 -
Car01g02864 220 PANTHER LURP-ONE-LIKE PROTEIN 13 208 - -
Car01g02864 220 PANTHER - 13 208 IPR007612 -
Car01g02864 220 Gene3D - 13 203 IPR038595 -
Car01g02864 220 Pfam LURP-one-related 14 194 IPR007612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02864 Car-Chr1 53789037 53790774 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02864 - - gmx:100787085 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02864 01 53789037 53790774 Car01g02864 01 53789037 53790774 ECH
Car01g02864 01 53789037 53790774 Car06g02342 06 25306114 25308349 PCT