Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02848 ATGGAAGGCATAACAGAGGGACTTAACAACATCAACATTAATAACAACTCCGATTCGTATAAGAAGAATCGCATTCAAGTCTCTAACACCAAGAAACCTCTTTTCTTCTATGTTAATCTCGCTAAGAGATACATGCAACAGCATAATGAGGTGGAACTCTCAGCACTAGGAATGGCGATTGCCACAGTGGTAACTGTTGCTGAAATTTTGAAAAATAACGGGCTTGCTGTTGAAAAGAAAATCATGACATCAACTGTCGACATAAAGGATGATTCTAGAGGTAGACCTGTCCAAAAGGCCAAGATTGAAATAGTACTTGGGAAGACAGCAAATTTTGATGAGCTGATGGCAGCTGCGGCGGCTGAAGATGCTGAAAATGGTGATATTGAAGAGCAGACTGCATGA 405 0.4074 MEGITEGLNNININNNSDSYKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEIVLGKTANFDELMAAAAAEDAENGDIEEQTA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02848 134 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 128 IPR014560 -
Car01g02848 134 SUPERFAMILY AlbA-like 22 117 IPR036882 GO:0003676
Car01g02848 134 Pfam Alba 23 78 IPR002775 GO:0003676
Car01g02848 134 Gene3D - 21 132 IPR036882 GO:0003676
Car01g02848 134 PIRSF UCP030333_Alba 1 134 IPR014560 -
Car01g02848 134 PANTHER - 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02848 Car-Chr1 53690800 53692647 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02848 - - gmx:100527472 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02848 01 53690800 53692647 Car01g02848 01 53690800 53692647 ECH
Car01g02848 01 53690800 53692647 Car06g02357 06 25623527 25626660 PCT