Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02847 ATGAAAGGGATTGTAGGAAACCCTCTACGCCTAAAATCAGTGAATCATATCTCCCTCATTGTCAAATCAGTGGAAGAATCTATCAACTTCTACCAAAATGTTCTTGGATTCATCCCCATCAGGAGGCCTGAATCATTTAATTTTAATGGGGGATGGCTATTTGCATATGGGATAGGAATTCACTTGCTGCAAGCAGAGAAACCTGAAAACATTCCAAGGAAGAAGGAAATTAATCCAAAGGATAATCATATTTCATTCCAGTGTGAAAGCATGGGGGCAGTGGAGAAGAATTTGAAGGAGATGGAAATTTGTTACGTGCGTGCAATGGTGGAAGAAGCTGGGATACAAGTACATCAATTGTTTTTCCATGATCCAGATGGATTCATGATTGAAATATGCAATTGTGATAGTATCCCTGTTATCCCTTTAGATTGTGACATGGTCAGACCATGCTCTACACTCAACCTTGAGATCATGCTCTAG 483 0.3975 MKGIVGNPLRLKSVNHISLIVKSVEESINFYQNVLGFIPIRRPESFNFNGGWLFAYGIGIHLLQAEKPENIPRKKEINPKDNHISFQCESMGAVEKNLKEMEICYVRAMVEEAGIQVHQLFFHDPDGFMIEICNCDSIPVIPLDCDMVRPCSTLNLEIML 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02847 160 CDD VOC_like 14 132 - -
Car01g02847 160 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 132 IPR004360 -
Car01g02847 160 Gene3D - 7 137 IPR029068 -
Car01g02847 160 PANTHER - 1 159 - -
Car01g02847 160 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 135 IPR037523 -
Car01g02847 160 PANTHER BNAC05G11680D PROTEIN 1 159 - -
Car01g02847 160 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 7 134 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02847 Car-Chr1 53666544 53668758 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02847 - - tcc:18595729 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02847 01 53666544 53668758 Car01g02847 01 53666544 53668758 ECH
Car01g02847 01 53666544 53668758 Car06g02358 06 25634115 25636632 PCT