Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02793 ATGAAAATCTCAAAAGATACATGTTACGCCTACACACATCTCCTATGGCCATGCCAACCTCGTAACGATCAAAACCATATAGTTTTCTCCAAACGTTTTCAAGTCACGTGCACGGTGAGCCTCCTTCTCTTATTCACCAGCGCGTACATTTTCTGGCCGTCGGATCCGTATCTCAAGATCGTGCGGTTGAAACTGAAGCGGATTAAGGTGCATCGCGTGCCGCACATCACCGTAGACATATCCATGCTCCTCACGCTGAGCGTGCAAAATGCTGACGTGTATTCGATGGACTTTGGAGCGGTTGACGTGGCGGTTTCCTATAGGGGGAAGCCACTGGGGCACGTGAGGTCGGAGAATGGGCACGTGAGGGCAATGGGATCCTCTTTTGTAGACGCTGATGCGGAATTTGCTGGCATTGGTGTGCTGCCTGAGATAGTCTTCTTGCTTGAGGACCTTGCTAAGGGTACGGTACCCTTTGATACGGTTAGCCAGGTTAGGGGTCAAATGGGAATTCTCTTCTTTCATTTTCCCATTAAGGCAAAATTATCATGCGAAGTTTTGGTCAGTACAATCAACCAGACAATTGTTCGTCAACATTGTCTTCACGAGGTAAACCTTAAGAAGAGCAAGTCAAAACTGAAGAAGAGTCAGAAGATGTTAGTCCCTTTGTATATATACCCTTTGGTGACAATGCCAATAAGCTTGAGAAAGTTTTGGAGGAAGATTAAGAGAGCTAAGAGGAAGTTTTTCAGTTCTTCATCACCACCTATAGTTCATGGCCAATACGACCTTCTATCCTATTCTCAGAACTTCGATGATGGCTATTTCATCGATCCCGATAGCGTTTCTCGGTCATTCTCCGCTCGATTTGCAGCCCCCTCCATGATTTTATACAACAATGATAACACCAACATGATGTAA 921 0.456 MKISKDTCYAYTHLLWPCQPRNDQNHIVFSKRFQVTCTVSLLLLFTSAYIFWPSDPYLKIVRLKLKRIKVHRVPHITVDISMLLTLSVQNADVYSMDFGAVDVAVSYRGKPLGHVRSENGHVRAMGSSFVDADAEFAGIGVLPEIVFLLEDLAKGTVPFDTVSQVRGQMGILFFHFPIKAKLSCEVLVSTINQTIVRQHCLHEVNLKKSKSKLKKSQKMLVPLYIYPLVTMPISLRKFWRKIKRAKRKFFSSSSPPIVHGQYDLLSYSQNFDDGYFIDPDSVSRSFSARFAAPSMILYNNDNTNMM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02793 306 Pfam Late embryogenesis abundant protein 85 182 IPR004864 -
Car01g02793 306 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 202 - -
Car01g02793 306 PANTHER EXPRESSED PROTEIN 7 202 - -
Car01g02793 306 SUPERFAMILY LEA14-like 41 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02793 Car-Chr1 53197960 53202466 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02793 - - cam:101505811 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02793 01 53197960 53202466 Car01g02793 01 53197960 53202466 ECH
Car01g02793 01 53197960 53202466 Car06g02412 06 26631236 26634122 PCT