Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car01g02719 | ATGACAACTTACGGCACAATCCCAACCTCATCATCAACCCCTACTAACCTCGAGTTTATCTCACGCGCCAAAGAAAGAATCAAAACCGGACTAGGAACTCGCCGTCCATGGAAAATCATGTTCAATTTCCGATCGTTCAACCTTCCAACCGGTTTCTCCGACGCAATCTCCCGCGTCAAAACAAACATCGGTTACTTCCAGATGAACTACGCAATCGTCTTTCTCATCGTGATTTTCCTAAGTCTCTTATGGCATCCAATCTCACTCATCGTCTTCGTTGTTCTCATCGCCGCTTGGCTCTTCCTCTATTTCCTCCGTGATGAACCGCTTGTTATCTTCGGAAGAGTCGTCAGTGACCGTATCATTCTCGTTCTCATGGCGATTATCACCATCGGTTTGCTTCTGCTAACCGGAGCAATACTCAACATCTTACTCGCGGTTGTTATCGGTGTTGTTTTGGTTTTGGTGCACGCTGCTATAAGAAACACTCACGATCTCTTCCTTGATGAAGAAGAAGCACTttcttcttcttga | 534 | 0.4494 | MTTYGTIPTSSSTPTNLEFISRAKERIKTGLGTRRPWKIMFNFRSFNLPTGFSDAISRVKTNIGYFQMNYAIVFLIVIFLSLLWHPISLIVFVVLIAAWLFLYFLRDEPLVIFGRVVSDRIILVLMAIITIGLLLLTGAILNILLAVVIGVVLVLVHAAIRNTHDLFLDEEEALSSS | 177 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car01g02719 | 177 | Pfam | PRA1 family protein | 31 | 171 | IPR004895 | - | |
| Car01g02719 | 177 | PANTHER | PRA1 FAMILY PROTEIN F2 | 1 | 173 | - | - | |
| Car01g02719 | 177 | PANTHER | PRENYLATED RAB ACCEPTOR 1-RELATED | 1 | 173 | IPR004895 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car01g02719 | Car-Chr1 | 52616649 | 52617773 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car01g02719 | K20359 | - | gmx:100788152 | 244.973 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car01g02719 | 01 | 52616649 | 52617773 | Car01g02719 | 01 | 52616649 | 52617773 | ECH | |
| Car01g02719 | 01 | 52616649 | 52617773 | Car07g03118 | 07 | 58349962 | 58350753 | PCT |