Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02682 ATGGAAGAAGAGGAAGACATGTCACCACCCTTCTGGCTGCAAAACAGTGGGGCCAACCGACGCCGCCTCAGCCGCTCATACTCTCTATTAGTTACCTCCGGCACTGTTGTCATAATTCTTCTAGTAACTACAATTGCATTTGCCTTGGTTGTAGTTCCAACATTGCAATCTTTCACATCTCACATTTTCAGACCAAATTCAGTTAAGAAGAGTTGGGATTCCCTTAACATTCTGCTTGTTCTCTTTGCCATATTCTGTGGTTTCCTTAGCAGAAACAATAATACCAATGAAAGTCCGCGTTCCTATGAAGATCAAACCTTTTCAGACACAAACACGCGACAAGAGTACGAGAAACCAAACCTAGAACCGGAAACAGAAATGCCACCATTTTCTTGGTATGAGTACTCAGAAGATAGAACTTCATATAACAGGTTGAGGAGTTTCAACTCTTACCCCGATCTCCGGCAAGAGTCTTTGTGGGTCGCAGGCGATGAACGGTGGAGATTTAACGATGATACACATGTTAATGGTTACCGTGGATTGGACATGAACTTGAAAGAAGCAAACATCAAGAACATTAACATATCTTTCAAAGGAAAGAAGAAGGAGAAGTCGGAAACAATTGTGAAAACAAAAAATAACAATGCAGAGAGAAAGAATAAAAAAACAAGTGCAACAAAAGAGTTGTTAACATCTTTGAACGGAAAGAAGAAGAAACAAAGACATAAAAGCGTAGAAAATTTTCAAATCATTCAGAATTCTGAACCTGCTACTACTATGCTGAATTCATCACGTCCTTCACCGCCACCACCGTCTTCATCTTTTCATAATTTGTTATCATTGAAACAAAACAAACAGAAGAAACTTAACTCTGTTTCTCAGCTGCAACATCATGTTTCATCTATGCCTATGTCGAAAACAAACGACAATGAATATTTTTCTGTGTTGGAAGAAAAAGTGGTAACCGGTAATGAGTCGCCGTTGATCTCAATACCTCCACCGCCTCCTCCACCGCCGCCATTCAAAATTCCAGCATGGAAATTCAAGGTGCAGGGTGACTTTGTTAGAATAGATAGCATTGATGTTGATAGCAAAGCTGGTAATTTTATTGAATGCTTCAGGGCTGGTTTAAGGATGGAGAAAATAAACTCCATGAAGACGAAGGAGAATCAGGGGATAGGGAGGTCTAATCTCTATAATACCCTTCATCAAAACCACAAACAAAAGAAGAAGTTGAAGGCATTGTCATAA 1251 0.3981 MEEEEDMSPPFWLQNSGANRRRLSRSYSLLVTSGTVVIILLVTTIAFALVVVPTLQSFTSHIFRPNSVKKSWDSLNILLVLFAIFCGFLSRNNNTNESPRSYEDQTFSDTNTRQEYEKPNLEPETEMPPFSWYEYSEDRTSYNRLRSFNSYPDLRQESLWVAGDERWRFNDDTHVNGYRGLDMNLKEANIKNINISFKGKKKEKSETIVKTKNNNAERKNKKTSATKELLTSLNGKKKKQRHKSVENFQIIQNSEPATTMLNSSRPSPPPPSSSFHNLLSLKQNKQKKLNSVSQLQHHVSSMPMSKTNDNEYFSVLEEKVVTGNESPLISIPPPPPPPPPFKIPAWKFKVQGDFVRIDSIDVDSKAGNFIECFRAGLRMEKINSMKTKENQGIGRSNLYNTLHQNHKQKKKLKALS 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02682 416 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 134 181 - -
Car01g02682 416 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 359 400 - -
Car01g02682 416 MobiDBLite consensus disorder prediction 252 277 - -
Car01g02682 416 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 215 360 - -
Car01g02682 416 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 124 - -
Car01g02682 416 PANTHER COTTON FIBER (DUF761) 1 124 - -
Car01g02682 416 PANTHER COTTON FIBER (DUF761) 134 181 - -
Car01g02682 416 PANTHER COTTON FIBER (DUF761) 215 360 - -
Car01g02682 416 PANTHER COTTON FIBER (DUF761) 359 400 - -
Car01g02682 416 MobiDBLite consensus disorder prediction 96 114 - -
Car01g02682 416 MobiDBLite consensus disorder prediction 96 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02682 Car-Chr1 52346330 52348414 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02682 - - mtr:MTR_2g099520 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02682 01 52346330 52348414 Car07g03072 07 57789547 57791860 PCT