Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02672 ATGTCAGGCAGCATATGGGAAGAATTTCCAATACCTTTCATCTCTCAGGTTATCAAGTTAATTCAAGATGGTCATAGCCAAAGGCACCAAAATTTTGCACAAGCTGTTTCACCTGGTGATTCTGCTTCAGGTAATGTGTCAGAAATAATTAGACAGAGTGATAATACTATTAGAGTGGATCCTTTAGATCATTTCAAAAAGTACAGAGGAGGATTCAACATCACCAACAAGAATTATTGGAGTTCAGTGATATTCACTGGAGTTTATGGATATGCAATTGGAATGCTGTGCCTTCTATGTGGAATACTGTATGGAATTTTTTTGCTAATCACCAAGTTTTGTTATCACAAAAATGAAGGAAGAAGAAGAATGAAGATGGATTTTCCTTGTAATTACAAGAGCTGTGTTGTTTCACTAATTCCTTTGGCTATATTTCTCATGTTAATGGTCATAGTTGCAACAGGACTAGTTCTTGTAGGGAGTGCAAGATTCCATTCTGAAGCAAAAACTTCAGTTGATATCATAATCAACACAGCAAACAAGGCATCAGAAACAATACACAACACAACAGAAGCATTAAAAGGCATGGAGAGTAATTTGATGGAAGCCAATGTCAATGTTGAGGCTTCTAAAAATCTTGACTCTACAGCTAAGAGACTTGAAGATGCATCTGCAAATATTGATATGCAAGCTAGAAAGAATAGGAGACTTATCAACAAGGGCTTGAAAATAGTGTTTGTAGCTACTACCATGATTATGAGCTTCAACTTGGTTGCTGTAATAGTTTTGTCAGTTTCCGGAGTACTAAGGTTAAGGAAGGCACTCAACCTGTTTCTTGTACTTTGCTGGTTGATGACAGTGTTATGCTGGCTATTCTTTGGAGTCTATTTTTTCTTACAAAAATTTtctagtgatgcttgcacagctcttgacaactttcaagaaaatcctTATAACAACAGCCTAAGCTCTATCCTCCCATGTCATGAATTGCTCAAAGCAAAACTAGTTCTATCTAAATTTAGTGTTGGAATCTATGATCTTGTTAATGAGGTGAATGCCAACTTGCAAGCAACAACATATCCAAATCTTGTTCATGTTTGCAATCCTTTCTCAGCACCACCAAATTATTTCTACCAGCCTGAAAATTGTGCAGATAATACTATACGAATAGGCGACATTCCAAAGGTATTGAAGGCTTTTACTTGTTTGGATGCAAATGATGGGACATGTGAGATGGGAAATTTTATAACAGATAGTGAATACCTTAGAGTTGAAAATTACACAAATGCAATTCAAGACTTATTGAATGTGTATCCAAGTATGGAACATTTATTAGAATGCAAGACTTCAAGTGTCTCTCTCGAACTGCTCCTTTTTGCTGCCATAACAGATTCTTTGGATGGAGTGCCACTGTATCCTTTGTACAAGCGTCTTGCTTCCGCTTTGTTGTCGTGTATGGAATCTGAAGCATTTTGTAGTACAGGCTGCAATTTATCCATGACCAATGAATTTGAAAGTTCTTCCATGCTGCATAAACACAATGAATGGCACAAATTGATTGTGGAGAAAGGATCTGAAATAGTGAATATTTTGAAGAGTGTTTCCTTTGAACTCCATGTTCAAGAACCTTTTTTTACACAGCTAAAAGATGGTCTGAAAACAATTGAGGGGAGGTGTGCCAGCGGCAAATACAACAGGATTGAATTAGGAAATCGGATTCTCTTAAATAAGTCTTTGGTGTTTGAAGTTCAGGGACTAAAGTGGTATCCTTCATTCTTTGACATGTTGGAGACAGAATGTCTTGGAAAAGTTCTTCCAGGAGTTGAAAGTGTTGAAGAAGGTGTAAAGATCTATCGGAGGTTTTACACGGAAGAGAAAGAACAGACAAATGGCGTTCTTGCAATCACTGTTTCAAAACTCCCGGTTCAACCGTACACTTCTTTGGCTAGCTTACTTTCTGGATTAAGCTTTGAGGGTGTTCAAGGCCTTCTCGGTCTAATGCATACTACCGGGACAATTCCTAATGCACTTCCACCTCCAAGATCAACTCTCTTAGCGTCATTTAATTCCCCATGCAACCCAAACGAAAATGCCTTGACTCATGGAGCTCGAGCATTGGCGAAGCATGCCTGTAGGAGTAGCAGTGGTTATTGGGGTTCTCTGGTTGGAAATGATTCCAATAAAAATAGGCTTGCAGTGGATGTTATTAACAAGTTAATAGCACATTGTTGTTGGATGAATATACACACCGTCCCGCCACATGGAGTTGTCTTTGAAATAAGGGTTGCTGATGGATATGGTGCGCGTTGGTCAGAGGATGGATGTAAGTTTATTGGATTTTTAGAGCCATACATTCATGATGGTCACTCAAAGGGATGGAAGCATTAG 2391 0.3764 MSGSIWEEFPIPFISQVIKLIQDGHSQRHQNFAQAVSPGDSASGNVSEIIRQSDNTIRVDPLDHFKKYRGGFNITNKNYWSSVIFTGVYGYAIGMLCLLCGILYGIFLLITKFCYHKNEGRRRMKMDFPCNYKSCVVSLIPLAIFLMLMVIVATGLVLVGSARFHSEAKTSVDIIINTANKASETIHNTTEALKGMESNLMEANVNVEASKNLDSTAKRLEDASANIDMQARKNRRLINKGLKIVFVATTMIMSFNLVAVIVLSVSGVLRLRKALNLFLVLCWLMTVLCWLFFGVYFFLQKFSSDACTALDNFQENPYNNSLSSILPCHELLKAKLVLSKFSVGIYDLVNEVNANLQATTYPNLVHVCNPFSAPPNYFYQPENCADNTIRIGDIPKVLKAFTCLDANDGTCEMGNFITDSEYLRVENYTNAIQDLLNVYPSMEHLLECKTSSVSLELLLFAAITDSLDGVPLYPLYKRLASALLSCMESEAFCSTGCNLSMTNEFESSSMLHKHNEWHKLIVEKGSEIVNILKSVSFELHVQEPFFTQLKDGLKTIEGRCASGKYNRIELGNRILLNKSLVFEVQGLKWYPSFFDMLETECLGKVLPGVESVEEGVKIYRRFYTEEKEQTNGVLAITVSKLPVQPYTSLASLLSGLSFEGVQGLLGLMHTTGTIPNALPPPRSTLLASFNSPCNPNENALTHGARALAKHACRSSSGYWGSLVGNDSNKNRLAVDVINKLIAHCCWMNIHTVPPHGVVFEIRVADGYGARWSEDGCKFIGFLEPYIHDGHSKGWKH 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02672 796 CDD ASCH_PF0470_like 537 640 - -
Car01g02672 796 Gene3D Hypothetical protein. 535 642 - -
Car01g02672 796 SMART ASCH_2 539 642 IPR007374 -
Car01g02672 796 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 30 450 IPR040283 -
Car01g02672 796 PANTHER OS11G0264500 PROTEIN 30 450 - -
Car01g02672 796 Coils Coil 193 240 - -
Car01g02672 796 Pfam ASCH domain 539 638 IPR007374 -
Car01g02672 796 SUPERFAMILY PUA domain-like 536 643 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02672 Car-Chr1 52216312 52231734 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02672 - - gmx:100811143 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02672 01 52216312 52231734 Car06g03706 06 68788991 68791979 PCT