Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02668 ATGAACAAGATGCTTTCAAAGGTTTCAACAACTGCCATGTCCTCTTTTTCTTCCTCATCATCTAGGGTAAGAGCTGGGTTTAGTGTGTGGCCTAATGTGAGGCAACTTTGCTTTAGAAAAGGCGTTCTGTATGGATTTATGCGACTCTTTTCTACTCCATTAAAAACGCTGCGTGGAGGAGCTAGTCGCTCACTCAGAGTGTCTCGGTTTTGCAGTGTTGTGAATATGTCTTCTTCATTGCAGATTGAATTGgtaccttgcctgagtgacaattatgcgtaccttttacatgacattaatacgggcacagttggagttgttgatccttctgaagctttgcctgtCATAGATGCATTGAGTAAGAAAAATCGAAATTTGACTTACATACTCAACACACACCATCATCATGATCACACTGGTGGAAATGCAGAATTAAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCCGGCATTGATATCCATTTGAATGACGGTGATAAGTGGATGTTTGCAGGCCATGAGGTGCATGTAATGGACACACCTGGTCACACTAGAGGCCACATAAGCTTCTACTTTCCGGGATCCGCAGCAATTTTTACAGGAGACACTTTGTTCAGCTTATCATGCGGCAAACTCTTTGAAGGAAGCCCTGAAGAGATGCTATCTTCTCTTAGAAAGATCACATCTTTACCAGACAATACAGATATTTATTGTGGACACGAGTACACATTGAATAATACGAAGTTTGCATTGACGGTCGAACCTGAAAACAAGGATCTTCAATCCTATGCTGCCCATGTGGCTTACCTTCGAAGTAAAAGCTTGCCCACAATTCCAACCACACTGAAGATGGAAAAGGCTTGCAATCCGTTCCTCCGTACATCCAGTGAACAAATCCGGAAATCATTAAACATTGCAGCCGCAGCTGATGATGCAGAAGCCCTGGGTATCATCCGGCAAGCAAAGGATAAATTTTAG 1002 0.3882 MNKMLSKVSTTAMSSFSSSSSRVRAGFSVWPNVRQLCFRKGVLYGFMRLFSTPLKTLRGGASRSLRVSRFCSVVNMSSSLQIELVPCLSDNYAYLLHDINTGTVGVVDPSEALPVIDALSKKNRNLTYILNTHHHHDHTGGNAELKARYGAKVIGSGTDKERIPGIDIHLNDGDKWMFAGHEVHVMDTPGHTRGHISFYFPGSAAIFTGDTLFSLSCGKLFEGSPEEMLSSLRKITSLPDNTDIYCGHEYTLNNTKFALTVEPENKDLQSYAAHVAYLRSKSLPTIPTTLKMEKACNPFLRTSSEQIRKSLNIAAAADDAEALGIIRQAKDKF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02668 333 Pfam Hydroxyacylglutathione hydrolase C-terminus 249 333 IPR032282 -
Car01g02668 333 CDD hydroxyacylglutathione_hydrolase_MBL-fold 85 248 IPR035680 -
Car01g02668 333 Hamap Hydroxyacylglutathione hydrolase [gloB]. 80 333 IPR017782 GO:0004416|GO:0019243
Car01g02668 333 Pfam Metallo-beta-lactamase superfamily 93 248 IPR001279 -
Car01g02668 333 SMART Lactamase_B_5a 90 248 IPR001279 -
Car01g02668 333 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 83 333 IPR017782 GO:0004416|GO:0019243
Car01g02668 333 PANTHER BETA LACTAMASE DOMAIN 4 333 - -
Car01g02668 333 Gene3D - 80 333 IPR036866 -
Car01g02668 333 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 4 333 - -
Car01g02668 333 SUPERFAMILY Metallo-hydrolase/oxidoreductase 80 332 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02668 Car-Chr1 52189551 52192643 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02668 K01069 - gmx:100819370 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02668 01 52189551 52192643 Car06g03702 06 68758655 68763122 PCT