Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02660 ATGGCATCAAGCAATGGTATCCCAACAGGCAACGGTCTCATCGTAAGCTTCGGCGAGATGCTGATCGACTTTGTCCCAACGACTTCCGGCGTATCACTAGCGGAGGCGCCCGGTTTCCTCAAAGCACCCGGCGGCGCACCGGCTAACGTAGCCATCGCCGTTTCCAGACTCGGTGGCAAAGCTGCGTTTGTAGGCAAACTCGGTGACGATGAGTTCGGTCACATGCTCGCCGGGATCTTGAAAGAAAACGGCGTCGTCGCCGATGGTATAACATTCGATCAAGGTGCACGCACTGCTTTGGCTTTTGTTACTCTACGCGCCGATGGAGAACGTGAGTTCATGTTCTATAGAAATCCCAGTGCTGACATGCTTCTTAAACCTGAAGAACTCAACCTCGAACTCATCAGATCTGCAAAAGTTTTCCATTATGGATCCATAAGCTTGATTGTGGAGCCATGCAGATCAGCACACTTGAAGGCAATGGAAGTTGCCAAAGACGCCGGCTGCCTTCTCTCTTATGATCCAAACCTCCGCTTACCCTTGTGGTCCTCAGCCGATGAAGCTCGCAAGCAAATTCTCAGTATATGGGAAAAGGCTGATTTGATCAAGGTTAGTGATGTGGAGCTAGAGTTCCTGACTGGAAGTGACAAAATTGACGACGCTTCTGCTTTGTCATTGTGGCACCCCAATTTGAAGTTGCTCCTTGTCACTCTCGGTGAAAATGGCTCAAGATACTACACCAAGAATTTCCATGGATCAGTAGATGCATTTCATGTCAAAGCAGTTGATACAACTGGTGCTGGTGATTCCTTTGTTGGTGCTCTATTGTCCAAGATTGTTGATGATCAGTCCATACTAGAAGATGAACCAAGGTTAAGAGAAGTGCTCAAGTTTGCAAATGCATGTGGAGCCATCACAACTACTAAAAAGGGAGCAATTCCTGCCCTTCCCAAAGAGGAGGATGTACTTAGCCTGATCAAAGCCTGA 987 0.4823 MASSNGIPTGNGLIVSFGEMLIDFVPTTSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKAAFVGKLGDDEFGHMLAGILKENGVVADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKDAGCLLSYDPNLRLPLWSSADEARKQILSIWEKADLIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTLGENGSRYYTKNFHGSVDAFHVKAVDTTGAGDSFVGALLSKIVDDQSILEDEPRLREVLKFANACGAITTTKKGAIPALPKEEDVLSLIKA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02660 328 Pfam pfkB family carbohydrate kinase 13 318 IPR011611 -
Car01g02660 328 Gene3D - 12 328 IPR029056 -
Car01g02660 328 PRINTS Ribokinase signature 39 58 IPR002139 GO:0016301
Car01g02660 328 PRINTS Ribokinase signature 194 209 IPR002139 GO:0016301
Car01g02660 328 PRINTS Ribokinase signature 234 245 IPR002139 GO:0016301
Car01g02660 328 PANTHER HEXOKINASE FAMILY MEMBER 19 325 - -
Car01g02660 328 CDD bac_FRK 13 313 - -
Car01g02660 328 PANTHER BNAA04G18320D PROTEIN 19 325 - -
Car01g02660 328 SUPERFAMILY Ribokinase-like 14 326 IPR029056 -
Car01g02660 328 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 44 68 IPR002173 GO:0016773
Car01g02660 328 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 263 276 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02660 Car-Chr1 52154813 52157896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02660 K00847 - gmx:100803713 602.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02660 01 52154813 52157896 Car06g03693 06 68692315 68695174 PCT