Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02628 ATGAGTACCGTTATTAAGTTTTTACAAGCTACAACAGTTGCAATACTTATACTAGTGCTAAGCACTACCGTCCGGTCATGTCCGCCGTCGGAAAGggcggcgctactagcattcaaggcggctctccacgattcatacctcggcatcttcaactcatggaccggcgccgactgctgtcacaaatggtacggcgttagttgcgacaaagaaacccgccgcgtcgccgatattaacctccgcggcgagtcggaggatccaatattcgaacgagcacaccgcaccggctacatgaccggttacatttcaccggcgatctgtaaactcactcgtctcTCAAGCATAACCGTCGCCGATTGGAAAAATATATCCGGCGAGATTCCTCGTTGCATCACTTCACTTCCTTTCCTCCGAATCATTGACCTCATCGGAAACCGCATCTCCAGCACTATTCCCTCCGACATCGGTAGACTCCACCGCCTCACAGTTCTCAACGTCGCCGATAACGCTATCTCCGGTAACATCCCACCGTCGCTAACTAACCTCAGAAGTTTAATGCACCTCGATATTCGTAATAACCAGATCTCCGGGCCCATACCTAAAGACTTTGGCAGGCTTCCAATGCTGAGCCGGGCCTTATTAAGCGGTAACAAAATAAGCGGGCCTATTCCAGATTCAATTTCTCGTATTTACCGTCTCGCAGATCTGGATCTATCTCGTAACCAAGTTTCTGGGCCCATTCCAGAATCATTAGGTAAAATGGCGGTTTTATCCACACTTAATTTGGACATGAATAAACTTTCTGGGCCCATTCCAGCGAGTCTTTTTAATTCGGGAATAAGTGACTTAAACTTAAGCCGTAATGGATTAAATGGTAATTTACCTGATGTGTTCGGTGCAAGATCTTATTTCACGGTGTTGGATTTGTCTTATAACAGTCTTAAAGGGCCCATTCCAAAGTCCATGGGCCTTGCTTCTTATATTGGACATTTGGATTTGAGTTATAATCATTTGTGCGGTAAGATTCCTGTTGGATCCCCGTTTGATCATTTGGAAGCGTCGTCTTTTGTCTACAATGATTGTCTCTGTGGGAAGCCTCTCAAAGTTTGTGCAAATTAA 1116 0.345 MSTVIKFLQATTVAILILVLSTTVRSCPPSERAALLAFKAALHDSYLGIFNSWTGADCCHKWYGVSCDKETRRVADINLRGESEDPIFERAHRTGYMTGYISPAICKLTRLSSITVADWKNISGEIPRCITSLPFLRIIDLIGNRISSTIPSDIGRLHRLTVLNVADNAISGNIPPSLTNLRSLMHLDIRNNQISGPIPKDFGRLPMLSRALLSGNKISGPIPDSISRIYRLADLDLSRNQVSGPIPESLGKMAVLSTLNLDMNKLSGPIPASLFNSGISDLNLSRNGLNGNLPDVFGARSYFTVLDLSYNSLKGPIPKSMGLASYIGHLDLSYNHLCGKIPVGSPFDHLEASSFVYNDCLCGKPLKVCAN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02628 371 Gene3D Ribonuclease Inhibitor 24 90 IPR032675 -
Car01g02628 371 Gene3D Ribonuclease Inhibitor 91 371 IPR032675 -
Car01g02628 371 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 369 - -
Car01g02628 371 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 369 - -
Car01g02628 371 Pfam Leucine rich repeat 159 218 IPR001611 GO:0005515
Car01g02628 371 SUPERFAMILY L domain-like 26 368 - -
Car01g02628 371 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02628 Car-Chr1 51893541 51895094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02628 94 370 Receptor kinase-like Gene Family AT4G08850 30.719 2.31e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02628 - - gmx:100804739 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02628 01 51893541 51895094 Car01g02628 01 51893541 51895094 ECH
Car06g03655 06 67928489 67929797 Car01g02628 01 51893541 51895094 ECH
Car01g02628 01 51893541 51895094 Car06g03654 06 67917572 67918879 PCT