Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02608 atGGCTGTTGACCTACACACTGGTGACACTACTCATAATAATAACAACAACGACGACGATGATGATCATGTTCTCTCAGTTAGCGACAACAATCACGCCTATTCACCTTTAAAACCATCACCACCCCATTCCAACCACGTTCCAATGGATGACAACAACGAAGACGATTTCATCACCGAGTTAACTCACCAAATGACTCACTTCATGCTTCAAGAAGACGATCACTCATTCGATTCCTCCCACACTCACAATTCGCAACTGTCATGGGACATAACGAGTTCGCCTGAGTCAACTCTGTGGTCACCGGTGAGTTGTAACCGAGGGAGTTCAGAAGGTTCCTCGCAGGAACCATCGCCACCAGCTACACCTGGAAAGTTCCAAGACTCTTGTTGGAAGACAATAACAACCTACGATGTGTTTGAGAATAATACTATGAAGAAACTTAACGAAAGAGCGATTTCTAAATACAATCATGATTATGAGATTGAGAGTTCTAACAAGTCCTCCAATATTAATGGCCTTAGTTCATTCCAAACGTTGATTCAGGAACAGATTCGAGCCATTGAAGTAAAGCAACAACAACATAAAATCAGTGGCATGAAACAAGATCATGTTCTGTCTCCGAAGAAAGGTAATGGGCGGAACTGGGCTGGTCGTCGTGCAATAAGGCCCAGTCCAGTGCAGACCGGTTCAGGTATGCGGGCGGTTTATCTTGGTGGGTCCGGTTCAAGATGTGGGACCGGTGTTTTCTTGCCTGGTAGTGGAACTGCTGCTTCATCAGAATCAAAATCAAAATCAACCAACAAACAAGGAAAAGGTTGCTCCGCTGTCCTTATACGGCCAGACTATGTAAGCAAGAAAACAAGTGTCCTAATACCAGCTAGAGTTGTGCAGGCTTTGCAACTACACTTTGACAAAACGGCTGCACTGTCTCAATCCAACCCTCCTCTTAATGCCAATGATGATGTTGTGAGCAGCATGTATCCACTTGAGAACCACCGGTTCACGACAACGCCGACAGATGTCCTGAATGATATGATTCTGCCTCATGAATGGACGACGACACTCCAAGTGTTGGAAGTGGAGTTTGCGTTTTGGTGTTGCTGGCCTTGCACTTCATTCTGCTGCGACGTCGTTTTCCAACCAAACGACGGCACCGACACTCTTTTCTTTTTCTCCAAGCTAAACAACACTCAGTTTCATCCCTTTCATTTCTCGCTTCTCAGTTTTGCAGATGGAAAACAATTAGTAACATTTTTCCAACTGAAATCTCTTCTGGAAACAAAAAGGAATTTGGCAGAGAATTCTTTAAAAAGTTTTCCGAATCAGCAAAAGCAAGCAACTTGTGGAAGAGAAAATGAGGAAGACGAGGTTGTTAAGTATATGTCGAGTTTACCAGGTTATTTGGAGAGGGGAGAAAAAATCCCTGATAAGTGTTTGAATGTTGGAGTCCTTGATTGGGCCAGTCTAGAACATTGGCAGTACAGCCATAAACATGTACCCCACAGTAGTAGCCGGTGCTCAACATCGTCTAGTAATGCATCATCTTCTATTCGTACGGAGGAATTATCTGGCAATTCTAGAAGGGGTCTAAATTGGTCTCCTTCTCGTCAAAGGATAATCCGTCCGTCATTGCAACCTCACTCAATGGCTTCTACAAAGCAAGATCATTCTATTGCTGTCAAATCCTCTGGAGAAAATGTTGGAAATCGTCTGAATCTTAGAGGCAGCCACAGTGATATTGACATACAGAGAAAATATGTTCGGACTGTTGATCATCTTTCCCAAAACCATCCTACCAGTATACTGAAAGCATGTGACAAGAAACAATTACGTCCACATATTATTAAGGAAAGGGATATCTTGCCAAATGGCCGAATTTATGAGGCAGCATCATGTGGTAAGCTGGTAATGAGCACTCAAGCTAATCAAATGGAAAAGAAAGTGGAGAATTTACGAGAACAAAATATTGATGCGCATGATATGCTTGGGAAAAGAGATCCCATTGTTCTTATTTTACCTAGAGAAATCCCTGAAAAAAACAGTCATTGTGGAGCTCCTGATATGCAAACCACCTTGGATCAGAGGTTAGGAAGCCATAGTCAAACAAGATTTTCAATAAATCCTAAGGAACCTCCCCGTACATATCTGAACTGCAATGTTTCACACTCCTGTTCTCTGCCAGATGAACTTAGCGAAAGCCATTCTCAACCTAAAGAGTCACGATCCAGTTCCATAGATTCAGAAAGTTTTAAAATTCCTGTTTCTATTTTTTCAGAACCTTCAGCACCTGTACCGGTCAGAATGAGAATGAGTCCATCCAAATGTAGAAAGGCTGAGGAAAGGAAACACACCATTGCTGTATCTTCATCTGCAAATGAGCCTCCCAGGGAAGTAAACCAGAAAGTAACTGCTGAGAAATCAAGAAGCTCTTCACCTTTCCGTCGATTTAGCTTCAACATTGGCTTCACAAGTAAAGTTTCTGGTTGTAAAGAGGTTGCACATGTGCCACACCAGAGCTCCACAGCCACCCTTAAACCTAGTTCAGAAAATGTGAGAGGCTATGCTAACTCAAACATTACAGGCCGTGATAAACCTGGAAATGCTGGCAAAAGCAGGTCCAGCCCTTTGAGGAGACTCCTTGATCCGCTGGTGAAACCGAAGGCAACAAACTACCATCATTCTGTGGAGTTATCTCAAAAAGATTCAGAAAATGCGAGAGGTCATGCTGGCTCAAACATATCAGGTGCTGCTGGCAAAAGCAGGTCCAGCCCTTTAAGGAGATTACTTGATCCACTTCTAAAACCAAAGGCAGCAAACTGCCATCATTCTATGAATTTATTTCAAAAAGAGTCAGTGTTAACAAATAAGAATTGTAGGCCAGGTAATGGGAAATGTTCCACTCTACTGCCAGAGAAAGAATTGGACAAAGACCAGAGGTTTGGCTGTTCCACAGTCAACAATGCGGAATCGTCAAATTACGAGAGGTATATGCCATCAGCATCTCAAGCTCTACTGAGAATTTCCATGAAGAATGGTCAGCCCCTTTTTACATTTGCTGTTGGCAACAATAGCAACATTCTCGCTGCCACACTGAAGAACTCAACTGTTTCAAGACAAGATGAATGCAACAGTATCTATACTTTTTTCACTTTTAGGGAGGTTAAAAAGAAGAATGGAAGTCGGACTAATCACACGGGCAAAAGCAAAGGTTCTGATTACGTTCCCCAAGTAATTGCCCAAATGAAGGTTCCTGATTTGCTCTATGATTATTCAAATAGTCAAAATTGCACGGACTCTATCACAAAAGAGTTTGTTTTGTTTTCTGTAAAGTTAAAGCAAGGAGATGCTCAGGTGACTGACTATATGCCAAATGACGAGCTTGCTGCTATAGTTGTCAAATCACCCAAGTCTATCAATTATGCACATCAAAGCAGTTGCCATAAGGAATGTCAAGACTTATTACAGGTAACAGTGGTGCTTCCAAGTGGGGTTCATAGTCTTCCAAGCAATGGAGGACCTTCATCATTGATCGAGCGCTGGAAAACTGGTGGATCCTGTGATTGTGGTGGTTGGGATTTGGCTTGTAAACTAAAAATTCTTGCAAACAATAACCAAACCTGCAGAAAATCAAGAACATCAGAAGCTTATTTTGCAGATCAGCATGAGCTTTTCTTCCAGGGGAATGACCAAGGTCCAGATAACCGTCCTGTTTTCAATTTTTCTCTCTTCGAACCTGGAGTATATTCAGTAGCTTTTGGCTCATCACTTTCACCCTTGCAAGCATTCTCCATCTGCATAGCAATGGTGGATGGCAAGCTCCCTTATGAAAATTCTGGATCAAGAAACTCCATTGAAGGAAATAATTGGAGGGAATCTGTATCGGTTCAAACAGATGAACTAAAGGCTCATGGTAAATTTGAGGACATTCCTGGAAGTTACGTTGCTTATCCTCCGGTCTCTCCAGTTGGAAGGGTCTGA 3981 0.4243 MAVDLHTGDTTHNNNNNDDDDDHVLSVSDNNHAYSPLKPSPPHSNHVPMDDNNEDDFITELTHQMTHFMLQEDDHSFDSSHTHNSQLSWDITSSPESTLWSPVSCNRGSSEGSSQEPSPPATPGKFQDSCWKTITTYDVFENNTMKKLNERAISKYNHDYEIESSNKSSNINGLSSFQTLIQEQIRAIEVKQQQHKISGMKQDHVLSPKKGNGRNWAGRRAIRPSPVQTGSGMRAVYLGGSGSRCGTGVFLPGSGTAASSESKSKSTNKQGKGCSAVLIRPDYVSKKTSVLIPARVVQALQLHFDKTAALSQSNPPLNANDDVVSSMYPLENHRFTTTPTDVLNDMILPHEWTTTLQVLEVEFAFWCCWPCTSFCCDVVFQPNDGTDTLFFFSKLNNTQFHPFHFSLLSFADGKQLVTFFQLKSLLETKRNLAENSLKSFPNQQKQATCGRENEEDEVVKYMSSLPGYLERGEKIPDKCLNVGVLDWASLEHWQYSHKHVPHSSSRCSTSSSNASSSIRTEELSGNSRRGLNWSPSRQRIIRPSLQPHSMASTKQDHSIAVKSSGENVGNRLNLRGSHSDIDIQRKYVRTVDHLSQNHPTSILKACDKKQLRPHIIKERDILPNGRIYEAASCGKLVMSTQANQMEKKVENLREQNIDAHDMLGKRDPIVLILPREIPEKNSHCGAPDMQTTLDQRLGSHSQTRFSINPKEPPRTYLNCNVSHSCSLPDELSESHSQPKESRSSSIDSESFKIPVSIFSEPSAPVPVRMRMSPSKCRKAEERKHTIAVSSSANEPPREVNQKVTAEKSRSSSPFRRFSFNIGFTSKVSGCKEVAHVPHQSSTATLKPSSENVRGYANSNITGRDKPGNAGKSRSSPLRRLLDPLVKPKATNYHHSVELSQKDSENARGHAGSNISGAAGKSRSSPLRRLLDPLLKPKAANCHHSMNLFQKESVLTNKNCRPGNGKCSTLLPEKELDKDQRFGCSTVNNAESSNYERYMPSASQALLRISMKNGQPLFTFAVGNNSNILAATLKNSTVSRQDECNSIYTFFTFREVKKKNGSRTNHTGKSKGSDYVPQVIAQMKVPDLLYDYSNSQNCTDSITKEFVLFSVKLKQGDAQVTDYMPNDELAAIVVKSPKSINYAHQSSCHKECQDLLQVTVVLPSGVHSLPSNGGPSSLIERWKTGGSCDCGGWDLACKLKILANNNQTCRKSRTSEAYFADQHELFFQGNDQGPDNRPVFNFSLFEPGVYSVAFGSSLSPLQAFSICIAMVDGKLPYENSGSRNSIEGNNWRESVSVQTDELKAHGKFEDIPGSYVAYPPVSPVGRV 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02608 1326 Coils Coil 635 662 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 765 811 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 773 787 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 75 127 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 13 27 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 727 748 - -
Car01g02608 1326 PANTHER DUF3527 DOMAIN PROTEIN 899 1326 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 81 127 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 500 564 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 197 225 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 839 865 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 839 924 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 905 920 - -
Car01g02608 1326 PANTHER DUF3527 DOMAIN PROTEIN 427 904 - -
Car01g02608 1326 MobiDBLite consensus disorder prediction 1 54 - -
Car01g02608 1326 PANTHER EXPRESSED PROTEIN 899 1326 - -
Car01g02608 1326 Pfam Domain of unknown function (DUF3527) 999 1111 IPR021916 -
Car01g02608 1326 Pfam Domain of unknown function (DUF3527) 1144 1270 IPR021916 -
Car01g02608 1326 PANTHER EXPRESSED PROTEIN 427 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02608 Car-Chr1 51712155 51723654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02608 - - cam:101498980 1764.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02608 01 51712155 51723654 Car01g02608 01 51712155 51723654 ECH
Car01g02608 01 51712155 51723654 Car02g01659 02 45534492 45536764 ECH
Car03g01202 03 55784409 55787167 Car01g02608 01 51712155 51723654 ECH