Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02579 ATGGCCACGCCTTTGTTCCATCAATTTAAGAAGCAAGCTTCTTTCTTTTTCAAGGAGAAATTCAAGAGTGCTAGATTAGCTTTAACTGATGTTACTCCTGCAGAATTGATGACAGAAGAAGCTACAAATGGCAAATCACGTGTCACTGATTCCCCAACTCTTAAATCAATTTCAAGGTCTGCTTTTGAGATAGATGATTATTGGAGGATTGTAGAAATTCTGCATAAAAGACTGGCCAAATTTGACAAGAAGAATTGGAGGGCCTCTTACAATTCTCTGAGTGTGCTTGAACACCTATTGATTCATGGACCTGCAAGTAGTGCAGAAGAATTTCAGTGTGACCAAAATGTTATTAGACAGATGATATACTTTCAGCACACTGATAACAGTGGGTTCAACTGGGGACTTGCTGTCAAAAAGAAAGCAGAAAGGGTATTGAAATTGCTGGAAGAAGAAATTCATCTTAAGGAAGAAAGAAATCATGCTCGCAAGTTGTCCCGTGGAATTCAAGGTTTTGGGAGTATGTGCCAAAGTTCAACTCCAAAACAAGGCATTCAGAGGGGAAAATCACTGCCAACCACATTTGGCAAGAATGAAAATAAGGAAAACCAGTCCTCTTACTCAAACAATAGTTTCGACATAGCAGAAGCTAAATCTACTAGTCTTGGCCATCAGGGTGACAATCAAATGCTTCACAAATAA 702 0.3903 MATPLFHQFKKQASFFFKEKFKSARLALTDVTPAELMTEEATNGKSRVTDSPTLKSISRSAFEIDDYWRIVEILHKRLAKFDKKNWRASYNSLSVLEHLLIHGPASSAEEFQCDQNVIRQMIYFQHTDNSGFNWGLAVKKKAERVLKLLEEEIHLKEERNHARKLSRGIQGFGSMCQSSTPKQGIQRGKSLPTTFGKNENKENQSSYSNNSFDIAEAKSTSLGHQGDNQMLHK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02579 233 PANTHER EPSIN-2-LIKE 4 215 - -
Car01g02579 233 ProSiteProfiles ENTH domain profile. 26 159 IPR013809 -
Car01g02579 233 PANTHER EPSIN/ENT-RELATED 4 215 - -
Car01g02579 233 Gene3D - 28 175 IPR008942 -
Car01g02579 233 SMART enth_2 32 159 IPR013809 -
Car01g02579 233 MobiDBLite consensus disorder prediction 172 208 - -
Car01g02579 233 CDD ENTH 34 150 - -
Car01g02579 233 Pfam ENTH domain 32 152 IPR013809 -
Car01g02579 233 SUPERFAMILY ENTH/VHS domain 12 159 IPR008942 -
Car01g02579 233 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02579 Car-Chr1 51493612 51495013 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02579 K12471 - gmx:100812797 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02579 01 51493612 51495013 Car01g02579 01 51493612 51495013 ECH
Car01g02579 01 51493612 51495013 Car06g03589 06 67210684 67212767 PCT