Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02557 ATGGAAGAACATCTGGGTTCAATATTCAATTATCAAGAAAGCTCTGATCAATTGAGGCAGAAGCTCATAGACACAATGCTTGAACTCGAGAACACAAGGAATATGAAAACTGATTTACTCAACCTTCTTGAAATGGCTTATAGAGAAAGAGATCAAGCAAGAGAACAACTTCAAATTCTAGTGAAAAAATTGGTCCCTTCAACCTCAAACAAGTTTTATGAACCCCAACATGACAACAACAACAACCTTGTAATGTTTCAAACAACAAAAGCAAACTCAAGCATAACAGAATCCAATAGTCCATCACACGTGTCATCTCCAGTTGATTCTCTTATTGAAGCAGTTTCTTCTCCTGAGTTTTCAAATATTGGTGTTGATTCACATAACATGTGTTTTTACAAAAAGAATTTGGGTCATGACTTCAATGGGTCACTTAATAAATGTGAGGTTGATATTGCAAGTGGTGTGATTGATTTACTAGCAAAAGGAAAAGTTTTGCCACAAAAGGGTAAACTTCTTGAAGCTGTAATCAATGCTGGGCCTTTACTTCAAAATCTTGTTCTTTCTGGGCCACTTCCTACATGGAAAAATCCACCTCCTTTGAGTTCCATAAAAATTCCACCTTTTGGCATCAAAGAAATTGATGAGCTCAATTCATTTCAGAATTCAACAATTCAATGTTCTCACTCTTCTGGGTCAACGCCAATTCTCAATATCGCAAGTGTCACACCTAGCTCATGCCACAACAATACATGGGAGTTAACTTCAAATTCTTGTCTCAAGAAACAAAAGCTTCAATACTTTTGA 807 0.3631 MEEHLGSIFNYQESSDQLRQKLIDTMLELENTRNMKTDLLNLLEMAYRERDQAREQLQILVKKLVPSTSNKFYEPQHDNNNNLVMFQTTKANSSITESNSPSHVSSPVDSLIEAVSSPEFSNIGVDSHNMCFYKKNLGHDFNGSLNKCEVDIASGVIDLLAKGKVLPQKGKLLEAVINAGPLLQNLVLSGPLPTWKNPPPLSSIKIPPFGIKEIDELNSFQNSTIQCSHSSGSTPILNIASVTPSSCHNNTWELTSNSCLKKQKLQYF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02557 268 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 3 253 - -
Car01g02557 268 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 3 253 IPR012862 -
Car01g02557 268 Coils Coil 36 63 - -
Car01g02557 268 Pfam Protein of unknown function (DUF1635) 14 229 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02557 Car-Chr1 51319284 51321170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02557 - - mtr:MTR_2g096360 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02557 01 51319284 51321170 Car01g02557 01 51319284 51321170 ECH
Car01g02557 01 51319284 51321170 Car06g03562 06 66847613 66850153 PCT