Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02526 ATGGACAAGCACAAAAACAAAAGTGGTAGCATTGTGAAGCTCATTGAGAAGCTACAAAAAAGGCTTTTAATAGGGAGAAATAAATCAACATCAACCTATGTGCCAGAGGATGTGAAAGAAGGACATTTTGGTGTGATAGCTGAGGGTGGAAAGGAAGAAGAATCAAAGAGATTTGTGTTGCCATTAAGATGTTTAACCAACCCAACATTTGTGAGGCTATTGGAGCAAGCAGAAGAAGAGTATGGTTTTGATCATGAAGGTGCATTAACTATTCCTTGCAACCCTAGTGAGCTTCACAAGATGTTGCAAAAGCAATGGCAACAAGAAGAGGGAGGTGCTGAAAAATGCTACAACATGGAATTCATGCAATAA 372 0.3925 MDKHKNKSGSIVKLIEKLQKRLLIGRNKSTSTYVPEDVKEGHFGVIAEGGKEEESKRFVLPLRCLTNPTFVRLLEQAEEEYGFDHEGALTIPCNPSELHKMLQKQWQQEEGGAEKCYNMEFMQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02526 123 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR32-LIKE 15 110 - -
Car01g02526 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 15 110 IPR003676 GO:0009733
Car01g02526 123 Pfam Auxin responsive protein 29 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02526 Car-Chr1 51001544 51001915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02526 35 93 Calmodulin-binding Proteins AT3G43120 50.847 2.57e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02526 - K14488 gmx:100794278 147.902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02526 01 51001544 51001915 Car01g02526 01 51001544 51001915 ECH
Car01g02526 01 51001544 51001915 Car06g03445 06 64655999 64656553 PCT