Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02515 ATGGTAAATAGTACCCGTTCTAGTCAAAAGGCTAAGGATGAAGAAATTAATAATGGGAGGGTGACCCGGAGTAGCGAGAAAGCAAAAATCAACGCACATCTGCATGTATCGGATGCAGCTGGTATTAGAAAGTCTCTGAGAGAAACACTGACGACAAAGATAATTGCAAGCTCTTCAAGTACTCGGAAGTCCGGGCGAGTAGAGAAGAGACCACTACCAACTCCTGAAGCTAGAAGGAAATCTGAAAGGGTTGAGAAAAAGAAGACGCCAAGTCCTTTGACGAGATCTGGAAGAACTAGAAATCATTCTTCTTCCAGTCTTTCCGATTCTAAAAGCTCAGGGTCATCAGGTTCAAGTTCAAGTTCAAGGCAGAAGCTAAAGAAAGAGAAGAGTGTGAAACAGTTGATATTTGAAGCCAACGAAGTGAACGTAAATGAAGAACACAATATGGGAACTTCTGATGTTAAAATAAAGAGAATGGACGCTCGCATGTATCGGTCTCTCTTTAAACAACGAAAGAAAGATTGCCTTGGGATATTGGATAGGATTAGTAAACCAAATCAGGAAGGTGACAGTAGTAGTGGCGCCAAGATTGACGAATTATCTAAAGAGAGTTGTTCAGATTGTAAAGAAGTCTCAAAGAATGGTGCACTACCATCTGAAGATGCCAAAGCAAAAGAGACCAGAGTTGACTCTAGGTTGAGTGAGCCTATGACAAGTCTAGCAGAAAATAATGTGACTCCAGGTTTATTTATACCATCTAATGCCCCACCTCATGATAATAGTGTGGTACCAAAAAGGGTACGGCCTGATTGCTGCCGAGAGGATCCATTATCAATGTTAGTGTCAGGAAATTCTATACTAGATGATGCGGATTTTGTTAGTAACAATGTTGGGTTTGATGGGGGCGAAAAATTGGCACCTTCGAAGATAAAGGAAATCACAGTAGACATGGATTCAAATGATTCTTCCACATTATCTAAAGGTGACAACTGCAATTTAGTTCATGTGGCTATCCCTTCAAGGTTAGGTGGAAATATTTTGGGGAACGGCGACTCATGTTCCAGACGAATAAGGTTGGATTACAATTCTACAGTCAAGGAGTCGTGTGACCCACGTGCAACCGAGGATAGCATTGTGGAAGACATAAATTTTCTGGCTCTTCTTGATGGCCATAGTGATAATGAAACAGATGGTTTAATATCTAATTCCAATAATAGGGCTGTTCAACTGAAGGAGAAATTGTCAAGTCATATTGCATACAGATGCAAGTCTGACTCCTTTAGGTTTGTTGAATATTGGGTTCCTGTACAAATATCTAATGTGCAGCTTGAGCAGTATTGTGCTACTTTGCTTTCAAATGCTTCAATTCTTTGCTCGTCACCTAAGGTTGATAGTGTTGGGGCCATTCGCAATGTCCTCATTTCGATCCGTAAGTGTTGTAATCATCCCTATGTTATCGATCTGTCCGTGCAAGGTTTACTAACCAAGGGCCTTGTTAAAGAAGCTGAGATTCTGGATGTTGGAATAAAAGCAAGTGGCAAACTGCAACTACTTGATTCAATGCTCACAGAGTTGAAAAACAAAGATTTAAGAGCACTCGTTCTTTTCCAGTCTATTGGAGGTTCTGGAAAGGATTCAATAGGAGATATATTGGATGACTTCCTGCGACAAAGATTTGAATCAGATTCATATGAAAGAATTGATAAAAGTCTTTCGGCTTCCAAGAAGCAAGCCGCCATGAAGAAGTTTAACGACAAGAATAATAAGCGGTTTGTCTTTTTGTTGGAAACATCTGCTTGCCTTTCAAGCATCAAATTGTCATCAATTGATACTATTATTATATTTGATAGTGATTGGAACCCAATGAATGATATAAAATCCCTTCAGAAGATAACACTTGATTCACAGTCTGAGTTCATAAAAGTGTTCCGTTTTTATTCGACATTCACTGTTGAGGAAAAAGCCTTAATACTTGCTAAGCAAGATAAGGCAGTTGACATCAATGTAACTTATGCCAACCGGATTAATAGCCACATGCTCCTGATGTGGGGTGCATCACGCCTCTTTGATGAATTGAGGGGATTTCACGATGGTGCAACTTCTACACTATTGCTGGAAAAAACTGTCCTAGAGTTCTCAAGCATTATATCCGAGGCTGGTGAAGCTACTGATAGAAGCAACTGCTCAATTTTATTGAAAGTCCAGCAAAATGAGGGAGGATACTGTGCAAATTTTCCTTTGCTTGGTGAGCTGAAACTTGGGTCTCTGGATGAAGAGTCACCTCAAAATTTTTGGACTAAACTATTGGAGGGAAAACAGTTTCAATGGAAGTACTCATGTAGTACATCTCAGCGGAGCCGGAAAAGAATTCAGCCTTTTAATAGTTTGGCAGGTGGGCCCGACCTTGTGAGTGAAGGCATGGTGAAGAAGCGCAGGAAAGTGGGCAGCAATATTGTTGATCAGCCTTCATCAAATTCTGAGGGTGAAAAGTTATCCACTGGAATCAAGGCAGTCTCATTTTGTTTGCTTGATCAAATGCCAGATAGACCTCACGGTAATGATATTGAATCTGAGAAAAAGAGTAGTGTTCGTGATGAGCAGAGAAGCTTATATCTTTCTCTGAAGCCAGATATCACAAAGCTCTGTGAAGTTCTTCTTCTCCCAGATAATGTCAAGAAGATGGTTGATAATTTTCTTGTGTATGTTATGACCAATCATCATGTCATTAGAGAACCCGCGTCGATATTACAGGCTTTTCAAATATCTCTGACTTGGACTGCTGCTTCTTTGCTAAAGCACAAACTTGACCACAAGGCTTCTCTTATTCTTGCAAAAAAACATTTGAATTTTGACTGTGAGAAAAGAGAGGTGGAGTACATTTATTCTATGATGCGGTGTCTAAAGAGAATATTTTTATATCATACAAGCAATTATCATGGTACTCTTTCGCCAAAAGCTTCTGAATCATCAAATGGACTTTCATGTACAGGAGTGGCACAAGAGGTTGAATTGTTCAAAAAAGATTTGTCCAAAAGCATTAAAGAGATTCAGAAAAAGTGTGAAAAGTACTTGAATAAGCTACACCTTAAGCAGCAGGAAGAGAAAAATAGGTCGAGAGCAGTAATTGAAGTTGAAAAGGCTGGATTGGAGAGAACATTCAAAATAGAGTTAGCATTCATTCGATCCTGCTCTCCTAATGAGGTGTCGAAAACAGAAATGCTCAAGATTTTGAATATTGATTATCAAAAAAGGATTGAAGAACTGAATTGTCAGCATGAAACAAATCTCAAGGTTCTTGAGGACGAACAATCAGCTCAAATGCTAAAGTTTCAAGACTGGGAGGCCACTTGGGTGGAAGCTGTGAAGTCTTGGGCACAAAATGAATTGCTAAACATAGTTACTTCAAAGGAACTTGGGACTGGGGTTGATTACTTGCAGATGCGTGATCAAGTACAGTTTCCTGGTGGTCCAAATAATCATTTTGCTGAAGTAAATGGTCATGATAATATGGTTGAATCCTTGAAAGAAACTGGCACTGGGGTTCTTGAAACCCATTCCCCTGCAGTTGGTAGAACAGTTGAACAGCAAAATTCTCCAAATGCAACAACTCTTCTGAACCCCCCTTCATCTGTGAATCAAATATCTGAAAGAGGTTCATTAGATGTTCCAGTTTTAGATGGTGTTTTATCATCAAGGCCTTTTCAAGCTGTTTGTTCAACCAGTTTCCAAGATACAATTTCCCTTTCAAATCCACCTTTGGAGAAACAAATACCTGATGGAGTCTCTTTGAGTATTACTGATGGAGATATTCCTGTTACAGTGCCAGAAAATGCCCATGCAGTGGCTGATTGTCATAATAAAGATATAGAGCCTTCGACAAATGCTATGTTGGTGGATAACAGTACCACAAATGACCAGGAGGAAGGAGTACTTAGAAGCATGACCAGTGTCCCAGTATCTAGACAAGTTAATGTCATAGATCCTCTGGAACAAAATAAACAATTGCCATCTGTGGAGTCCACTGCTGAAAAGGATTCAGGTGGGGAAATGCAAAATTCTTCTGAACAGGTTGAACTAGCATCTAGTTCAGCTGATGTTGCACTAGCCAGTCAAATCATGATGATGCCTTTGAAGCAGGTGCATCAACTACCAGCTGCAGAGCTCTCTTCCAACTTGGCAACTGAAGATGAACATCAGCCAACCAGTGTAAGTGATATCCCCACTCATCATCCTGAGGTATCTTCTGTGGTTCCAAACAAAGATGCTGTGCAACCACACTCAAATTCGGAACTTGGTTTACATTCAAATCAAGTTGCTGTGCACCCTGCCACAAATTCAGATCTTGCTTCACTTACAGCCAGTAGAGTAAGAGCCCAGTCTTCCAACCCAAGAAATTTGTCAAATCCTTTGGAGATGAATAATCATCCTATCCAAACTACAGCCCATTCATCTCCCAGAACGCTTCCGCATTTGTGCTATGATCCACTTAAAAATGAATTCGAAAGAATACAGAAAAAAGTAATAGAACAGACTTCGAAAAACCATGAAGATATGAAATTGCGGTTGAAATCTGATTTTGAAAAGGAATTAGAGGAACTTCGAAGAAAATATGATGTTAAGTTACAGGAGCTTGAAGTTGAATTTCAGCAAAAAAAGAAGACTCTGGATACAAATCTTCACACGGTTTGTGTGAATAAGATCTTGGCAGATGCTTTTAGGTCTAAATGCTTGGATCTTAAAGTATCTGGTGCATCGGTAATGCAGCATGATTCAGTTGCACAGCAGGTGCTTCAACTTTCAAGACAACAAACTGCTACTCGGCCAGTCATGGTTTCCGGTTCTTCTTCCGGCGAGCCTCCTGCGACCAGTCTGCCCAGTCCCCCCATTGCTATTAGCTCACCGCATATGGTACCACCTGGTTACAGTAGTATGCCACGTACTTTCTCCAGTGTCTCTGCAAGACCACCTCTTATAAATACTACTAGGCTTTCAACCGCCCTAGATATTCAAACTGGTGGTGAGATACGAGCCCCTGCACCACATTTCCAGTCTTTTAGACCTCCAACATCTGTTCCACCCTCCAGTTTCTATCCTCTTCCACGAGGGATGCCAAGTCAGATAGCACCTAGTAACACTCGAGCAACTTCTCCCTCATATTCTCATGGCCCACCCCGGCAAAGACCGACAACCTATCAGTCTGATCCACAAATGGGACGCCGGCCTGACAGTGCAGGCAGGTTAGCCACTCCAAACTTACCTGCCATGGGTTTGCGTGGGAATGTTGGCAGTCAATCTACTATAAACCCTCTGAATGTTATTTCACGTTCGTCAGATGCGGCTCCAGTGAACCTAACCAGATTTGGGCCCAATAACAGCACCGTGGTGGCTAACTCATCGAATCAAGCTGCATCTCCAGATTTAGTATGTTTATCAGATGATGAGTGA 5448 0.4101 MVNSTRSSQKAKDEEINNGRVTRSSEKAKINAHLHVSDAAGIRKSLRETLTTKIIASSSSTRKSGRVEKRPLPTPEARRKSERVEKKKTPSPLTRSGRTRNHSSSSLSDSKSSGSSGSSSSSRQKLKKEKSVKQLIFEANEVNVNEEHNMGTSDVKIKRMDARMYRSLFKQRKKDCLGILDRISKPNQEGDSSSGAKIDELSKESCSDCKEVSKNGALPSEDAKAKETRVDSRLSEPMTSLAENNVTPGLFIPSNAPPHDNSVVPKRVRPDCCREDPLSMLVSGNSILDDADFVSNNVGFDGGEKLAPSKIKEITVDMDSNDSSTLSKGDNCNLVHVAIPSRLGGNILGNGDSCSRRIRLDYNSTVKESCDPRATEDSIVEDINFLALLDGHSDNETDGLISNSNNRAVQLKEKLSSHIAYRCKSDSFRFVEYWVPVQISNVQLEQYCATLLSNASILCSSPKVDSVGAIRNVLISIRKCCNHPYVIDLSVQGLLTKGLVKEAEILDVGIKASGKLQLLDSMLTELKNKDLRALVLFQSIGGSGKDSIGDILDDFLRQRFESDSYERIDKSLSASKKQAAMKKFNDKNNKRFVFLLETSACLSSIKLSSIDTIIIFDSDWNPMNDIKSLQKITLDSQSEFIKVFRFYSTFTVEEKALILAKQDKAVDINVTYANRINSHMLLMWGASRLFDELRGFHDGATSTLLLEKTVLEFSSIISEAGEATDRSNCSILLKVQQNEGGYCANFPLLGELKLGSLDEESPQNFWTKLLEGKQFQWKYSCSTSQRSRKRIQPFNSLAGGPDLVSEGMVKKRRKVGSNIVDQPSSNSEGEKLSTGIKAVSFCLLDQMPDRPHGNDIESEKKSSVRDEQRSLYLSLKPDITKLCEVLLLPDNVKKMVDNFLVYVMTNHHVIREPASILQAFQISLTWTAASLLKHKLDHKASLILAKKHLNFDCEKREVEYIYSMMRCLKRIFLYHTSNYHGTLSPKASESSNGLSCTGVAQEVELFKKDLSKSIKEIQKKCEKYLNKLHLKQQEEKNRSRAVIEVEKAGLERTFKIELAFIRSCSPNEVSKTEMLKILNIDYQKRIEELNCQHETNLKVLEDEQSAQMLKFQDWEATWVEAVKSWAQNELLNIVTSKELGTGVDYLQMRDQVQFPGGPNNHFAEVNGHDNMVESLKETGTGVLETHSPAVGRTVEQQNSPNATTLLNPPSSVNQISERGSLDVPVLDGVLSSRPFQAVCSTSFQDTISLSNPPLEKQIPDGVSLSITDGDIPVTVPENAHAVADCHNKDIEPSTNAMLVDNSTTNDQEEGVLRSMTSVPVSRQVNVIDPLEQNKQLPSVESTAEKDSGGEMQNSSEQVELASSSADVALASQIMMMPLKQVHQLPAAELSSNLATEDEHQPTSVSDIPTHHPEVSSVVPNKDAVQPHSNSELGLHSNQVAVHPATNSDLASLTASRVRAQSSNPRNLSNPLEMNNHPIQTTAHSSPRTLPHLCYDPLKNEFERIQKKVIEQTSKNHEDMKLRLKSDFEKELEELRRKYDVKLQELEVEFQQKKKTLDTNLHTVCVNKILADAFRSKCLDLKVSGASVMQHDSVAQQVLQLSRQQTATRPVMVSGSSSGEPPATSLPSPPIAISSPHMVPPGYSSMPRTFSSVSARPPLINTTRLSTALDIQTGGEIRAPAPHFQSFRPPTSVPPSSFYPLPRGMPSQIAPSNTRATSPSYSHGPPRQRPTTYQSDPQMGRRPDSAGRLATPNLPAMGLRGNVGSQSTINPLNVISRSSDAAPVNLTRFGPNNSTVVANSSNQAASPDLVCLSDDE 1815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02515 1815 MobiDBLite consensus disorder prediction 1393 1410 - -
Car01g02515 1815 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 431 666 IPR027417 -
Car01g02515 1815 MobiDBLite consensus disorder prediction 211 233 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1603 1621 - -
Car01g02515 1815 Gene3D - 1494 1576 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1393 1430 - -
Car01g02515 1815 Gene3D - 430 666 IPR027417 -
Car01g02515 1815 Gene3D - 402 429 IPR038718 -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1789 1807 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 63 92 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1323 1360 - -
Car01g02515 1815 Coils Coil 1007 1034 - -
Car01g02515 1815 PANTHER HELICASE PROTEIN MOM1 4 1815 IPR039322 GO:0031507
Car01g02515 1815 MobiDBLite consensus disorder prediction 1 130 - -
Car01g02515 1815 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 518 684 IPR001650 -
Car01g02515 1815 PANTHER HELICASE PROTEIN MOM1 4 1815 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1686 1700 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1789 1815 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 211 235 - -
Car01g02515 1815 Pfam Helicase conserved C-terminal domain 516 627 IPR001650 -
Car01g02515 1815 MobiDBLite consensus disorder prediction 94 122 - -
Car01g02515 1815 CDD SF2_C_SNF 513 626 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1603 1642 - -
Car01g02515 1815 Coils Coil 1524 1555 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1706 1738 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 1679 1751 - -
Car01g02515 1815 MobiDBLite consensus disorder prediction 8 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02515 Car-Chr1 50864090 50886532 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02515 - K11642 gmx:100810773 1420.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02515 01 50864090 50886532 Car01g02515 01 50864090 50886532 ECH
Car01g02515 01 50864090 50886532 Car06g03456 06 64947310 64959000 PCT