Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02327 ATGAAATCATTAATCAAAAACCAACCTCTAACCAAATTATTTTTAATCTCATCTTCATTATGTGCAATTTCTCTCTTCTTGTTTCTAACCATACTACTCTTTACCACTTCAAATATACTAATACTAAACATTGGTAATTCTTCACCACAACTTAGTACTGAATCTAGTCCCACCACTATTGATCATCTTATATTTGGAATTGCTTCAAGTGGAATATCATGGCCTAAAAGGAAAAAATATTCCAAACTTTGGTGGAACAATAAAAATATGAAAGGCTGTGTTTTTGTAGATACTCTTCCAGTCGAAGAAAATGATATAAAAATTAATATCGATGATGTTTCTTTACCGCCTCTTTGTGTTTCTGAAGACACTTCCAATTTTCATTACACGTATAAACCAGGCGGATTAAGATCAGCAATCCGCGTGGCGCGTGTCGTGAAAGAGACAGTTGAATTGAACCATTCTAATGTTAGGTGGTATGTGTTTGGTGATGATGACACAATTTTCTTTCCCGAGAATCTTGTTAAGACACTTTCTAAATATGATCATAGGAATTGGTACTATGTTGGTGCTTACTCTGAGAATTATGAAGCGTCTCATGTTTTTGGTTTTGGAATGGCTTTTGGTGGAAGTGGTTTTGCTTTAAGTGCTTCTTTAGCAAATGTATTGGCTAAGGTTTTTGATTCATGTATTAGAAGATATTCTCATCTTTATGGAAGTGATGCTAGAGTGTTCTCTTGCATAACAGAACTTGGTGTTGGATTAACATATGAACCAGGTTTTCATCAGGTTGATTTAAGAGGAAATATCTTTGGTTTATTGGCTGCACATCCATTAAGTCCATTGTTGTCCTTACATCATCCAGATATTACTGATGCAATCTTTCCTAACATGACAAATTCAAACTCACTTCAACATTTATTTGAAGCTGCAAATGTTGATTCTCAGAGAATCCTACAACAAACAGTTTGCTATGAAAGGCGATTTTCGCAAACAATTTCAATCTCATGGGGATATGCAGTTCAATTATTCCAAAACAATGTTCTTTTGCCTGATGTTCTTAGGGTGCAAGAAACATTCAAGACATGGAAAGAAAATACTGTTATGGCAGGAATATATACTTTCAGCACAACAAAACTTCATCATGATCCTTGTAAAAGACCAAACATTTTTTATCTAGACAATGTATCTTCTGATAAAGATGGTATCATTACTAGCAATTATAAGAAATCTTTTCGAAATTGTTCGTACGATACGTCGAAGAATCTTGAAGTGATTAAAGTTGTCACAAATAAGTTAGATTTTGACAGTAAACAGTTGCAGGCTCCAAGAAGACAGTGTTGTGATGTGTTGCCATCTAACTCTGGTCACTTAATGGAAATTGCAATTAGAGAGTGCAAATATGAAGAATTGATTTATATGCATTGA 1428 0.3403 MKSLIKNQPLTKLFLISSSLCAISLFLFLTILLFTTSNILILNIGNSSPQLSTESSPTTIDHLIFGIASSGISWPKRKKYSKLWWNNKNMKGCVFVDTLPVEENDIKINIDDVSLPPLCVSEDTSNFHYTYKPGGLRSAIRVARVVKETVELNHSNVRWYVFGDDDTIFFPENLVKTLSKYDHRNWYYVGAYSENYEASHVFGFGMAFGGSGFALSASLANVLAKVFDSCIRRYSHLYGSDARVFSCITELGVGLTYEPGFHQVDLRGNIFGLLAAHPLSPLLSLHHPDITDAIFPNMTNSNSLQHLFEAANVDSQRILQQTVCYERRFSQTISISWGYAVQLFQNNVLLPDVLRVQETFKTWKENTVMAGIYTFSTTKLHHDPCKRPNIFYLDNVSSDKDGIITSNYKKSFRNCSYDTSKNLEVIKVVTNKLDFDSKQLQAPRRQCCDVLPSNSGHLMEIAIRECKYEELIYMH 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02327 475 PANTHER FRINGE-RELATED 3 473 - -
Car01g02327 475 Gene3D - 50 327 - -
Car01g02327 475 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 3 473 - -
Car01g02327 475 Pfam Protein of unknown function, DUF604 201 448 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02327 Car-Chr1 49079377 49081947 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02327 57 440 Glycosyltransferase AT1G05280 53.827 1.47e-154 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02327 - - gmx:100779943 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03223 06 59634129 59635838 Car01g02327 01 49079377 49081947 PCT