Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02310 ATGGCGACACTGGATTCCGACGTCCCAATGGTACCGGCCGGAGATACCTCCTGCTGCGCCGGTCCCTCTTCTTCCAAGAAGCCAAAGCGCTTCGAGATCAAGAAGTGGAATGCTGTTTCTCTCTGGGCATGGGATATCGTTGTCGATAATTGTGCTATTTGCAGGAATCATATCATGGATCTGTGTATTGAGTGTCAGGCAAACCAGGCTAGCGCCACTAGCGAGGAATGCACTGTTGCTTGGGGTATGCCTCTAAACTTGTGTAGAATTCAACTAATTGCGTTTTTTGTAGCTTGTATTATTATTGATTTTGTGGTTTCTAGAAGATTTTTAGTTGATGGTATTTAA 348 0.4483 MATLDSDVPMVPAGDTSCCAGPSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGMPLNLCRIQLIAFFVACIIIDFVVSRRFLVDGI 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02310 115 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 101 IPR013083 -
Car01g02310 115 SUPERFAMILY RING/U-box 29 100 - -
Car01g02310 115 Pfam Anaphase-promoting complex subunit 11 RING-H2 finger 31 83 IPR024991 GO:0005680|GO:0008270|GO:0031145|GO:0061630|GO:0097602
Car01g02310 115 PANTHER RING BOX 1 84 - -
Car01g02310 115 PANTHER RING-BOX PROTEIN 1A 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02310 Car-Chr1 48904155 48907990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02310 K03868 - csv:101209538 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02310 01 48904155 48907990 Car06g03247 06 60165349 60168679 PCT