Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02298 ATGAGTTGGAAAAGTAAAGGAGAAGTGGTTCCTAGAAGTGTTATGTCACATAAATGGATGGTTTTCTTGTGTATTGGAAGCTTCTGCGCTGGCATGTTTTTCACCAACAGGATGTGGAATATTCCTGAGCCTAAAGGACTTGCAAGGATAACAGCAATGGAAGCTGAAAAATTAAATTTAGTTTCAGAGGGTTGTAATTCAAGAATTTTGCAAGAGAAGGAAGTGAAGAGGGAAACAAAAGACATTTATAAGGATGTTTTCAAGACACATAAAACCATAAAAAATTTGGACAAGACTATTTCAAATTTAGAAATGGAACTAGCTTCTGCTAAGGCAACTCAAGAGTCTCTAAAAAGTGGTGCTCCTGTATCAGAAGAAGATATCATGAAAAGTGAATCAACTGGTAAGAGAAGGTACCTAATGGTCATAGGAATTAACACTGCTTTCAGCAGTAGAAAAAGAAGAGACTCGGTTCGCGCCACGTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAAGAAGAAAAGGGCATTATCATCCGTTTTGTAATTGGTCATGGTGCCACATCAGGTGGAATCCTAGATAGAGCTATTGAAGCAGAAGATAGTAAGCATGGAGATATCCTAAGGCTGGATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACATACTTTGCCACtgctgttaatttgtgggatgctgatttctatatcaaagttgatgatgatgttcatgttaatATAGCAACATTGGGAGAAACTCTAGTTAGACATCGATCGAAACCTCGAGTGTACATCGGATGCATGAAATCTGGACCTGTTCTTTCTCAAAAAGGAGTAAGGTACCATGAACCAGAACACTGGAAATTTGGTGAAAATGGAAACAAGTACTTTCGTCATGCAACAGGACAATTGTATGCCATTTCAAAAGATTTGGCTGCATATATTTCAACAAACAAGCATGTTCTTCACAAGTATGCAAATGAGGATGTGTCATTAGGAGCTTGGTTTATTGGACTTGATGTTGACCACATAGATGATAGAAGATTATGTTGTGGTACACCACCAGATTGTGAATGGAAGGCTCAAGCAGGCAATGTTTGTGTTGCTTCATTTGATTGGACATGCAGTGGAATTTGTAGGTCTGCTGAAAGAATAAAAGAGGTACACAAGAAATGTGGGGAAGGTGAGAAAGCCTTGTGGAGTGCTTCTTTCTAG 1227 0.3725 MSWKSKGEVVPRSVMSHKWMVFLCIGSFCAGMFFTNRMWNIPEPKGLARITAMEAEKLNLVSEGCNSRILQEKEVKRETKDIYKDVFKTHKTIKNLDKTISNLEMELASAKATQESLKSGAPVSEEDIMKSESTGKRRYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEEKGIIIRFVIGHGATSGGILDRAIEAEDSKHGDILRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGETLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEHWKFGENGNKYFRHATGQLYAISKDLAAYISTNKHVLHKYANEDVSLGAWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKKCGEGEKALWSASF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02298 408 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 7 400 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car01g02298 408 Coils Coil 93 113 - -
Car01g02298 408 Pfam Domain of unknown function (DUF4094) 16 112 IPR025298 -
Car01g02298 408 Pfam Galactosyltransferase 153 350 IPR002659 GO:0006486|GO:0016020|GO:0016758
Car01g02298 408 Gene3D - 133 352 - -
Car01g02298 408 PANTHER HEXOSYLTRANSFERASE 7 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02298 Car-Chr1 48767892 48772794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02298 1 408 Glycosyltransferase AT1G05170 78.186 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02298 K20855 - gmx:100793931 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02298 01 48767892 48772794 Car01g02298 01 48767892 48772794 ECH
Car01g02298 01 48767892 48772794 Car06g03262 06 60571585 60576669 PCT