Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02288 ATGGCCAACCAAGAAAATCTCCCTCTCTATGAAAAAATTTGGGTCAAAAGAACATTTCAAAGAGCAATAGACATTTTCATTCTTCTCCTCTTATTTTCTCTTCTTAGTTTCCGTTTTCTCTCTATAAACACCTTCACACTTCCATGGTTCCTTGCTTTCTCATGTGAATCTTGGTTCACTTATACTTGGATTGTTATTCTCAACACCAAATGGAGTCCTGCGCTAACCAAAACATACCCCCAACGTCTCCTCCAACGAGTACCAGAGCTTCCACGTGTGGACTTGTTTGTGACAACAGCAGATCCTGTACTTGAACCTCCCATAATCACATTGAACACTGTGTTGTCTCTTTTGGCACTTGATTATCCATCTAATAAGCTAGCATGTTATGTTTCTGATGATGGTTGTTCACCTTTTACCTTTTATGCCCTTGTTGAAGGCTCAAAATTTGCTAAGCATTGGGTACCTTTTTGTAAAAAGTATAATATACAAGTTAGAGCCCCTTTAAGATATTTCTGTGAAGTTACCAATTTTGAAAGTGAAGACTCATCAGAATTCAAACAAGAATGGTTCCTAATGAAGGATATGTATGATAATCTTAGCCGAAATATTGAAGATGTGACCAGAAATTTAATTCCATTCCCACTTGAGGGAGAATTTGAAGTGTTCTCAAATACAGAAAAAATAAATCATCCAAGCATAGTTAAGGTTATATTGGAGACCAAGGATGAACTTTCTAATGGATTGCCTCACTTAATCTACATATCAAGAGAGAAGAGACCAAAGTATCAACACAACTACAAAGCAGGAGCTATGAATGTGTTGACAAGAGTCTCTGGATTGATGACAAATGCTCCCTTCATGTTGAATGTAGACTGTGACATGGTTGTGAACAATCCCAAGATTATTCAACATGCTATGTGCATTTTAATGGATTCTAAGAGTGGAAAAGATGTTGCTTTTGTTCAATGTTTCCAACAATTTTATGATGGAATAAAAGATGACCCTTTTGGAAATCAATGGGTGGCTGCATTTGAGTACATAATAAGGGGCATGGCAGGACTTCAAGGACCTTACTATGGAGGAACAAACACCTTCCATAGAAGAAATGCTATTTATGGTCTTTATCCTGATGAAGTTCAATATGGAAAAAAAGTAGGAAAGTTAACAGAAAAGAAATTAATACAACAATTCGGAAGTTCAAAGGAGTTTGTCAAATCAGCAACACATGCTTTTGAAAGGAGTGATTACTCTACTAATAATGGTATTAGTCTTTCCAACTTTATTGAAGAAGCAATCCAAGTATCTGATTGTGGATATGATAATGGCACTTCTTGGGGTAAAAAGATGGGCTGGTTATATGGATCAATATCAGAGGATGTACCAACTGGGTTGAATATGCATAGAAAAGGTTGGAGATCAGAGTGTTGTACACCGGTTCAAACCGCCTTTAAAGGCTGCGCTCCGGTTGGATTACTCACTACAATGATCCAACAAAAGAGATGGGCTTCAGGCCTCACTGTTGTCTTCTTTGGCAGACACTCTCCTGTTATGGGCACCCTCTTTGGTAAGATCCAAATCAGGGCTGGATTGTCTTATTGTTGGCTTACCAATTGGGGTTTGCGTTCTGTCTTTGAAGTTTGCTATGCAGCTTTAGTTGCTTATTGCATAATCACCAACTCCAATATCTTTCCTAAGGGACTTGGGCTATGGATTCCTTTTACTCTATTCGTGATCTATAATTTGCATACTCTACAAGAGTATCTATCAACAGGGTTGTCATTAAGACATTGGTGGAACAACCAAAGAATGAGCATAATAAGAACCACAAGTGTATGGTTTATAGGATTTTTGAGTGCTATGCTTAAGATCTTAGGGATATCTGATTCAGTCTTTGAAGTAACACAGAAGAAAAACACAAGTTCCAGTGCTGCTGAAGATGATGCAAATGCTGGTAGGTTCACTTTTGATGATTCACCAGTTTTTGTGGTTGGTACAACCATTTTGCTGGTGCAATTGACAGCACTTTTTGTTAAGATTTTGGGGTTGCAATTACAAGCTCATAGTGGAAATGGATGTGGACTAGGTGAGTTGATGTGTAGTGTGTATCTAGTAGTATGCTATTGGCCATATCTCAAAGGGTTGTTTGCTAGAGGAAAATATGGGATTCCTTTATCTACCATTTTCAAGTCTGCACTTCTTGCGTTTATTTTTGTGCACTTTAGTAGAATTACCCTTATAAGTTGA 2247 0.3774 MANQENLPLYEKIWVKRTFQRAIDIFILLLLFSLLSFRFLSINTFTLPWFLAFSCESWFTYTWIVILNTKWSPALTKTYPQRLLQRVPELPRVDLFVTTADPVLEPPIITLNTVLSLLALDYPSNKLACYVSDDGCSPFTFYALVEGSKFAKHWVPFCKKYNIQVRAPLRYFCEVTNFESEDSSEFKQEWFLMKDMYDNLSRNIEDVTRNLIPFPLEGEFEVFSNTEKINHPSIVKVILETKDELSNGLPHLIYISREKRPKYQHNYKAGAMNVLTRVSGLMTNAPFMLNVDCDMVVNNPKIIQHAMCILMDSKSGKDVAFVQCFQQFYDGIKDDPFGNQWVAAFEYIIRGMAGLQGPYYGGTNTFHRRNAIYGLYPDEVQYGKKVGKLTEKKLIQQFGSSKEFVKSATHAFERSDYSTNNGISLSNFIEEAIQVSDCGYDNGTSWGKKMGWLYGSISEDVPTGLNMHRKGWRSECCTPVQTAFKGCAPVGLLTTMIQQKRWASGLTVVFFGRHSPVMGTLFGKIQIRAGLSYCWLTNWGLRSVFEVCYAALVAYCIITNSNIFPKGLGLWIPFTLFVIYNLHTLQEYLSTGLSLRHWWNNQRMSIIRTTSVWFIGFLSAMLKILGISDSVFEVTQKKNTSSSAAEDDANAGRFTFDDSPVFVVGTTILLVQLTALFVKILGLQLQAHSGNGCGLGELMCSVYLVVCYWPYLKGLFARGKYGIPLSTIFKSALLAFIFVHFSRITLIS 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02288 748 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 5 748 - -
Car01g02288 748 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 507 IPR029044 -
Car01g02288 748 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 391 IPR029044 -
Car01g02288 748 Pfam Cellulose synthase 385 739 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car01g02288 748 Pfam Cellulose synthase 93 382 IPR005150 GO:0016020|GO:0016760|GO:0030244
Car01g02288 748 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 5 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02288 Car-Chr1 48632335 48637838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02288 8 742 Glycosyltransferase AT2G32530 47.152 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02288 - - gmx:100796197 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02288 01 48632335 48637838 Car01g02288 01 48632335 48637838 ECH
Car06g03284 06 61450742 61459746 Car01g02288 01 48632335 48637838 PCT