Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02269 ATGTCGAGGCTAAAGGGTGTGTCAGTCTTTGTATGGATTAGACATTTGTTTTCCATAGATGACGCCAATAATTTGTTGAAGAGCGAGAATGACGATTACACTAACATGACATCACTTCCTCTCCTCAAAGGTTGGGGTGTTCCATCAATCAACTACAACCATTCCTCTAACATCAGCATCACAACCATCCTTACATTTCTTCCTCTTTATCAACTTCCATTCCCAGTGTTCTACACCTCTGTTGGATCTTCTTTTGTTGCCTCAGTTGACAATATGATCCAAAACAAAGAGAACATTAAGATGGAAAAAAGAGAAGACAAAAAAGAGAAATCAGGGGAGTTAGATATATGGAGTTCAATATTCTTGACGCAAAATGACAAAGATGAAGCTTCCAAATTAAAAACTCTTCCTTATATTCACCCACTTGAGAAAAAATCAAAAAGTTTTTTAAGTGAAAAGAGTCTCCAAATATGCACCGAGAGTCTTGGATCTGAAACAGGATCAGACGATTTCTCTTCTTCTAACACATCTTCTGAGGATAATAATTCAGAGGATGATGAAAAATTTAAAGAAGAAGTGAAAACATGTGATGAATTTGATGATGTGTTGAAAGTTCCAAAATACAACAACTATTATTATGTGAAGAAGTCTCCTAGTTTTCCTCCTCCACTCTCTTCACTCTCTACTCAAAGTCAacatggtcaaagtcaaacatttcaaatgaggtcccaccgcgacaatggaaggttatttttgttcctacaaactgtgtcggttccttcacaaAATTTCTTCGCTAAACGACAAAATGGTCGTCTTATTCTAACTTTTGTTAATCACGATGAAGAGGAAAAAGATTGTAATGAGATTGCGATAGAGAAAACACAAATGTTGTCAAGTGGATTAGAATTAACAGTGAAGAAGCTAATTGGGTTAGTCAACAAGAGTCCAAAATGGTCAAATAAGTTCAACAAAGTGCCTAATTTTGAGGATGTTAAAGTTGTGCAACATGGTTCATTGCCACGGTCATTGCCCTTCATAAATGGTTATCAATACTATTGGAGAACCAAGGCTATAGAAAACGTTGTTGCTCCTCTAATTCCTAATAATGATGCAATTAGTGATCAACAAAATAGCATTGGCAACAAGGTTGTTGTGTCTGAGAACATATATTATAAGGCTTCAAATCAAGCATCACAACAATTGTTGGTTATGAGAGGGAAGAATGGGGGTTACTTGGTTCACAATTTGAAGTTTTGCAAGGATTTTAGAACTTCAAGGTCTTTTATGTTTTGGGACACATGTTGCGTTGCTACTTGA 1320 0.3341 MSRLKGVSVFVWIRHLFSIDDANNLLKSENDDYTNMTSLPLLKGWGVPSINYNHSSNISITTILTFLPLYQLPFPVFYTSVGSSFVASVDNMIQNKENIKMEKREDKKEKSGELDIWSSIFLTQNDKDEASKLKTLPYIHPLEKKSKSFLSEKSLQICTESLGSETGSDDFSSSNTSSEDNNSEDDEKFKEEVKTCDEFDDVLKVPKYNNYYYVKKSPSFPPPLSSLSTQSQHGQSQTFQMRSHRDNGRLFLFLQTVSVPSQNFFAKRQNGRLILTFVNHDEEEKDCNEIAIEKTQMLSSGLELTVKKLIGLVNKSPKWSNKFNKVPNFEDVKVVQHGSLPRSLPFINGYQYYWRTKAIENVVAPLIPNNDAISDQQNSIGNKVVVSENIYYKASNQASQQLLVMRGKNGGYLVHNLKFCKDFRTSRSFMFWDTCCVAT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02269 439 Coils Coil 89 109 - -
Car01g02269 439 MobiDBLite consensus disorder prediction 162 179 - -
Car01g02269 439 Pfam Fantastic Four meristem regulator 219 277 IPR046431 -
Car01g02269 439 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 302 439 - -
Car01g02269 439 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 94 286 - -
Car01g02269 439 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 94 286 IPR021410 -
Car01g02269 439 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 302 439 IPR021410 -
Car01g02269 439 MobiDBLite consensus disorder prediction 162 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02269 Car-Chr1 48439076 48447379 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02269 - - cam:101491703 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02269 01 48439076 48447379 Car01g02269 01 48439076 48447379 ECH
Car01g02269 01 48439076 48447379 Car06g03303 06 61859769 61862353 PCT