Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02209 ATGGTAGTCATGGAAGAATTCAAGCACTTTGTGATTGTTAAGTTCAAAGAAGGTGTTGAAGTTGAAGACCTCACAAAAGGGATGGAGAAATTGGTCTCTGAGATTGATGTTGTCAAGTCCTTTGAATGGGGACAGGATATTGAAAGCCTAGATGTGTTGAGACAAGGTTTCACTCATGCATTCTTGATGACATTCAACAAAAAAGAAGACTTTGCAGAATTTCAAAGCCACCCAAATCATGTTGAGTTCTCTGAAAAGTTTTCAGCAGCTATTGAAAAGATTGTTCTGCTTGATTTCCCATCGACTCTTGTCAAGAAACCAGCATAA 327 0.3823 MVVMEEFKHFVIVKFKEGVEVEDLTKGMEKLVSEIDVVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFAEFQSHPNHVEFSEKFSAAIEKIVLLDFPSTLVKKPA 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02209 108 Pfam Stress responsive A/B Barrel Domain 8 100 IPR013097 -
Car01g02209 108 ProSiteProfiles Stress-response A/B barrel domain profile. 7 99 IPR013097 -
Car01g02209 108 PANTHER EXPRESSED PROTEIN 4 107 - -
Car01g02209 108 SUPERFAMILY Dimeric alpha+beta barrel 6 101 IPR011008 -
Car01g02209 108 PANTHER - 4 107 IPR044662 -
Car01g02209 108 SMART Dabb_2 7 101 IPR013097 -
Car01g02209 108 Gene3D - 2 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02209 Car-Chr1 47892557 47893990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02209 - - pvu:PHAVU_005G126400g 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02209 01 47892557 47893990 Car06g03387 06 63382454 63383720 PCT