Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02208 ATGATGCACATTAAAGTTGACATTATTATAGTTTCATCACTCTACAAATCAATCCTCTCCAACAAAAAACATATTTTGATCAAAGTCACATGGTGTAAAAACCATTCAAATCAAGGACTCACAATTACCTTTGATGAAGAAGAAAATCCACTAGCAAGTTCTTTCAAACTCAACACAAATTCAAGGTTTTTTAGGAAAAAGAAAGGAAGCAAATTTTTGGAACATTGTAACAATGATTTAAAAGTTGAAGTCTTTTGGGATCTTTCAAATGCAAAATATGAAAATGGTCCTGAACCTGTTGAAGGATTTTACATTGCAGTTCTTGTTGATTCAGAAATTGGTCTCATTCTTGGTGACATAGGTGAAGATTTTTTAACAAAGAAGATGAAAAAAAGAACCCTTTTGGCTAAAGTTTCACTTTTTTCAAAAAGTGAAATTTTTTCAGGTAACAACACAATTTACACAACTAAGGCAAAGTTTTGTGAAAGTGGAAATTTGCATGAGATTTTGATTAAATGCAGTGGTGAAAATGAAGGGTTTAATAAATTTCCTATTCTTAGTGTTTTTATTGATAAGAAGGTGGTGATTTGTGTGAAGAGGTTGCATTGGAATTTTAGGGGTAATCAAACAATTTTTGTTGATGGGTTGTTGGTGGATTTGCTTTGGGATGTTCATAATTGGTTTTTTAAAGGTGTTTCTAATGGGTGTGGTGTGTTTATGTTTAGGACTAGGAGTGGTTTGGATAGTAGATTATGGTTAGAAGAGAAATTGGATGTCAAAGATAAAGATAGACTTGGTTTTTCTTTGTTGATCTATGCTTGTAAGACCTCTTAG 834 0.3189 MMHIKVDIIIVSSLYKSILSNKKHILIKVTWCKNHSNQGLTITFDEEENPLASSFKLNTNSRFFRKKKGSKFLEHCNNDLKVEVFWDLSNAKYENGPEPVEGFYIAVLVDSEIGLILGDIGEDFLTKKMKKRTLLAKVSLFSKSEIFSGNNTIYTTKAKFCESGNLHEILIKCSGENEGFNKFPILSVFIDKKVVICVKRLHWNFRGNQTIFVDGLLVDLLWDVHNWFFKGVSNGCGVFMFRTRSGLDSRLWLEEKLDVKDKDRLGFSLLIYACKTS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02208 277 Pfam Plant protein of unknown function (DUF868) 10 275 IPR008586 -
Car01g02208 277 PANTHER DUF868 FAMILY PROTEIN 11 276 - -
Car01g02208 277 PANTHER EXPRESSED PROTEIN 11 276 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02208 Car-Chr1 47882683 47884773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02208 10 276 EF-hand Containing Proteins AT5G28150 36.900 2.80e-50 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02208 - - gmx:100775403 352.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02208 01 47882683 47884773 Car06g03390 06 63433825 63435063 PCT