Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02172 ATGTTGGAATTAAAGAGCCCTCTAAAGAGCAAGGAATGGTATGTTAAAATGAAGCTCATGAACAAACACAACAACACAAGACCTCAACATGACAAAACTTGTTTTTTCTTTACATATTACAAATGGGTTCTTTGGCTTTCTCTATCTCTCTATTTCTTCACCTCTTATCTCATCACCAACGACCCAATACCTCAACCAACATCACAAGACACATTAACCCATGTCTCAAATTATAAATCCAACGTTGTTTTTCATTCCCATTTCGAAACCACCAACACCACATCAACCCATAATGCTCTAGGGGTGTTGAAAAATTTGAAGGTGTTTATATACGAGCTACCTTCAAGATACAACAAAGATTGGCTTTTCAATGAACGTTGTAAGAGCCATTTGTTTGCATCAGAAGTTGCTATTCATAGAGCATTGTTGAAAAGTGAAGTGAGAACGTTTGACCCAAATGAAGCTGATTTCTTCTTCGTTCCCGTTTATGTATCTTGCAATTTCAGCACCGTTAATGGTTTTCCGGCAATTGGTCACGCGCGGGGTCTTATTTCCTCCGCGGTGGAACTCGTCTCCACAGAATATCCATTTTGGAATCGAAGCAGAGGATCCGATCATGTCTTCGTCGCTTCTCACGATTTCGGCGCGTGTTTTCACACCCTGGAGGATAAGGCAATGGGTGATGGAATTCTTGGAATATTGAAGAATTCAATTGTGTTGCAAACGTTTGGTGTTGTGTACAATCATCCTTGTCAAGACGTTGAGAATGTGGTCATACCCCCTTACATTTCGCCGGAGAAAGTTTTTAATACGCTCGATAAAGCTCCGGTGAACGGACGGCGAGATATTTGGGCTTTCTTCCGTGGGAAAATGGAAGTACATCCCAAAAACGTCAGTGGACGTTTTTACAGCAAGCGAGTGCGAACAGAAATATGGAGAAAATTCAACGATGATAGGAGATTTTACCTACAACGGCATAGGTTTTCCGGCTACCAGAATGAAATTGCACGCTCCGTGTTTTGTCTATGTCCGTTAGGGTGGGCCCCATGGAGTCCAAGGCTCGTTGAATCTGTTGCTCTTGGATGTGTCCCCGTTGTAATTGCAGATGGCATTCGATTACCCTTTTCCTCCACCGTCAACTGGCCGGAAATATCACTCACGGTGGCAGAAAAAGATGTCGGAAAACTCGATAAAATTCTAGAGCGCGTGGCTGCTACGAACCTAACTGTCATTCAGAAGAATCTGTGGGACCCAAATACAAGGCGGGCCCTACTTTTCAATAGTGAAGTCCAAGAAGGAGATGCCACGTGGCAAGTATTATTTAGTCTGAGTCAGAAGCTTGATAGGTCCTACCGAAGAAACACAGTTAATAGCGAATTAAAACATGACACGTAA 1395 0.4272 MLELKSPLKSKEWYVKMKLMNKHNNTRPQHDKTCFFFTYYKWVLWLSLSLYFFTSYLITNDPIPQPTSQDTLTHVSNYKSNVVFHSHFETTNTTSTHNALGVLKNLKVFIYELPSRYNKDWLFNERCKSHLFASEVAIHRALLKSEVRTFDPNEADFFFVPVYVSCNFSTVNGFPAIGHARGLISSAVELVSTEYPFWNRSRGSDHVFVASHDFGACFHTLEDKAMGDGILGILKNSIVLQTFGVVYNHPCQDVENVVIPPYISPEKVFNTLDKAPVNGRRDIWAFFRGKMEVHPKNVSGRFYSKRVRTEIWRKFNDDRRFYLQRHRFSGYQNEIARSVFCLCPLGWAPWSPRLVESVALGCVPVVIADGIRLPFSSTVNWPEISLTVAEKDVGKLDKILERVAATNLTVIQKNLWDPNTRRALLFNSEVQEGDATWQVLFSLSQKLDRSYRRNTVNSELKHDT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02172 464 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 29 457 IPR004263 GO:0006486|GO:0016757
Car01g02172 464 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 29 457 - -
Car01g02172 464 Pfam Exostosin family 104 402 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02172 Car-Chr1 47434551 47437121 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02172 K20889 - gmx:100807050 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02172 01 47434551 47437121 Car06g03433 06 64431414 64434036 PCT