Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02149 ATGATTACTGCAAGCAGACTCAAATCCGTCGATTTTTACAGAAAAATCCCGAGAGATTTAACGGAGGCATCATTATCTGGAGCAGGGTTATCCATAATGGCAGCTCTCTTCATGGTGTTTTTATTTGGAATGGAACTTAATGAATATTTATCTGTCAGCACCTCTACATCTGTGATTATTGACAAGAGTTCTGATGGGGACTTTTTACGTATAGATTTCAATGTCAGTTTTCCTGCACTCTCATGTGAGTTTGCTTCGGTTGATGTGAGCGATGTGCTGGGAACAAACAGGCTGAATCTTACAAAAACAGTTCGCAAGTTTTCTATTGATTCAGATTTAAGACCCACTGGGTCTGAATTTCATTCAGGCCCAGCTACCAACGTCATTAAGCATGATGATAAAGTGGATGAAGAATCCCTTGAAGGTGCTTTTGTATTCACATCAGACAATTTCGATAAATATGCTCATCAATTTCCAATTACTGCTGTAAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAGACCTTCATGGGAGAAGGCGGCTAAAATAATGAGAGAGAGATATGATCCGGAAATGGATGGTCGATTACTTATGGGGAAGGTAGATTGCACTCAAGAAGGAGACTTGTGCCGGAGGCATCACATACAGGGGTATCCATCGATTCGTATCTTTCGTAGAGGAAGTGATGTCAGAAATGACCATGGAAATCATGATCACGAGTCCTATTATGGAGATCGTGATACAGATAGCCTTGTTAAGACAATGGAGAATTTAGTGGCGTCTCTCCCTGCAGAGGCTCAGAAGCTAGCTTTGGATGATAAATCAAATGTTACAGAGAATGCTAAAAGACCAGCACCATCAGCTGGGGGTTGTAGAATTGAAGGATATGTACGTGTCAAGAAGGTTCCTGGAAACTTGGTGGTCTCAGCTAGATCTGATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATACACCATTTATCTTTTGGAAGGATGGTGTCACCTCAGGTTATGAGTGATGTCCAGCGCTTGATACCTTATGTTGGTAGCAGCCATGACAGGCTGAATGGTCTGTCATTCATCAACACAGATGATTTAGGAGCAAATATTACTATGGAGCATTACCTTCAGATAGTTAAAACCGAAGTGATTACCAGAAAAGATTATAAATTAGTTGAGGAGTACGAGTACACAGCGCACAGCAGTGTGTCACACAGTTTACACATTCCTGTTGCTAAGTTCCATCTTGAACTCTCCCCTATGCAGGTCTTGATAACAGAAAACCAGAAGTCTTTTTCGCATTTTATTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTACGGAATCCATTTTGCACAATACTATTAGGCTAATGAAAAAAGTTGAGCTGGGCAAAAATTTTTGA 1443 0.4075 MITASRLKSVDFYRKIPRDLTEASLSGAGLSIMAALFMVFLFGMELNEYLSVSTSTSVIIDKSSDGDFLRIDFNVSFPALSCEFASVDVSDVLGTNRLNLTKTVRKFSIDSDLRPTGSEFHSGPATNVIKHDDKVDEESLEGAFVFTSDNFDKYAHQFPITAVNFYAPWCYWSQRLRPSWEKAAKIMRERYDPEMDGRLLMGKVDCTQEGDLCRRHHIQGYPSIRIFRRGSDVRNDHGNHDHESYYGDRDTDSLVKTMENLVASLPAEAQKLALDDKSNVTENAKRPAPSAGGCRIEGYVRVKKVPGNLVVSARSDAHSFDASQMNMSHVIHHLSFGRMVSPQVMSDVQRLIPYVGSSHDRLNGLSFINTDDLGANITMEHYLQIVKTEVITRKDYKLVEEYEYTAHSSVSHSLHIPVAKFHLELSPMQVLITENQKSFSHFITNVCAIIGGVFTVAGITESILHNTIRLMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02149 480 CDD PDI_a_family 145 258 - -
Car01g02149 480 Pfam Thioredoxin 145 243 IPR013766 -
Car01g02149 480 Gene3D Glutaredoxin 135 288 - -
Car01g02149 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
Car01g02149 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Car01g02149 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Car01g02149 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
Car01g02149 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Car01g02149 480 Pfam Endoplasmic reticulum vesicle transporter 289 459 IPR012936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02149 Car-Chr1 47102091 47111180 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02149 - - gmx:100806869 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02149 01 47102091 47111180 Car01g02149 01 47102091 47111180 ECH