Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02147 ATGTGGAGAGATCAAGGAGTTTCAGCTGATTCTTTCTATGAAATTCGACCTGATTGCACCGATGTTCCCATTACTCGATTTAAGATCAAGGCTGGTAAAACACTAAGTCCAAGAAAATGGCATGCTGCATTTACTCCAGAAGGGTATCTGGATATAGGCAAGACTCTGAGACGAATCTACCGAGGGGGAATCCATCCATCAATAAGGGGAGAAGTTTGGGAATTTCTACTTGGTTGCTACGATCCCAAGAGTACATTTGAGGAAAGAGATCGGATAAGACAACGCCGAAGGCTGCAATATGCTACATGGAAAGAAGAATGTTGCCAATTGTTTCCTCTTGTCGGAAGTGGTAGATTTATCACATCACCTGTAATTACTGAAGATGGCGAGCCAATTCAAGATCCAATGATTCTGCCACAAACAAATCCAGAAAAGGGATTGGCTGCACTTCCTCAAGATAACAATAATAATATGTCTTCAAGTATAGATTCTGCAAATAATTTAGAAAACATGACAGACAAGAAAGTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACATTGGTTTTTTATGAGAAGCAAGAAAACTTGTCGAAACTATGGGATATTCTTGCTGTTTATGCTTGGATAGATAAAGAAGTCGGGTATGCTCAAGGAATGAGTGATCTATGCTCCCCAATGATAATACTTCTTGACAATGAAGCAGACGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTCGAGGAAATTTCAGATGCACTGGTCGCTCTGTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAATTGATCCAAAACTTCATAAACATATAGAACATATCGGTGGAGGCGACTATGTGTTTGCTTTTCGGATGCTAATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTACCTATGGGAGATGATGTGGTCTCTAGAATATGATCCTTACTTGTTCTTGATGTATGAAGAATCTCAATCGGCTTCTGGAAAAGCTGAGGGATTCAAAGGAAAAGCAAAGTCGATACAACAATGTGGAAAATATGAGAGAGAAAATCTGAAAAATGGAGCGAAGAATGCTGAACCTCCTCTCCCTATGTCTGTCTTCCTTGTTGCTAGTGTGTTGAAAGATAAAAGTACAAAACTACTCCATGAAGCGCGAGGCTTGGATGATGTTGTCAAGATATTGAATGATACAACAGGAAATTTAGATGCCAAAAAGGCTTGTACTGGGGCTATGAAGCTTCACAAAAAATATTGGAGAAAGGCCAAGAAAGCCTAG 1335 0.4015 MWRDQGVSADSFYEIRPDCTDVPITRFKIKAGKTLSPRKWHAAFTPEGYLDIGKTLRRIYRGGIHPSIRGEVWEFLLGCYDPKSTFEERDRIRQRRRLQYATWKEECCQLFPLVGSGRFITSPVITEDGEPIQDPMILPQTNPEKGLAALPQDNNNNMSSSIDSANNLENMTDKKVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYAQGMSDLCSPMIILLDNEADAFWCFERLMRRLRGNFRCTGRSVGVEAQLSNLASITQVIDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEMMWSLEYDPYLFLMYEESQSASGKAEGFKGKAKSIQQCGKYERENLKNGAKNAEPPLPMSVFLVASVLKDKSTKLLHEARGLDDVVKILNDTTGNLDAKKACTGAMKLHKKYWRKAKKA 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02147 444 Pfam Rab-GTPase-TBC domain 155 329 IPR000195 -
Car01g02147 444 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 40 291 IPR035969 -
Car01g02147 444 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 269 437 IPR035969 -
Car01g02147 444 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 444 - -
Car01g02147 444 SMART tbc_4 60 354 IPR000195 -
Car01g02147 444 Gene3D - 267 444 - -
Car01g02147 444 ProSiteProfiles TBC/rab GAP domain profile. 63 331 IPR000195 -
Car01g02147 444 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 444 - -
Car01g02147 444 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 156 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02147 Car-Chr1 47084195 47089064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02147 - - aprc:113854580 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02147 01 47084195 47089064 Car01g02147 01 47084195 47089064 ECH