Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02141 ATGGATCATGAACCTCCCTTTCTCAACACTTACAAGACCCTTCTGGAAAAAAGTTCAGAAAATGATGATGATTTGTACTCAATGGTAGAAAAAAGTGAGGAACTACCTTTGATTGATCTTGAGAAGTTATTAAACCCTCATGAGAGAGATGAATGCATGAAAGAAATAAGTGAAGCTGCAAGTGAATGGGGTTTCTTTCAAGTTATTAATCATGGAATTTCAAAGGAGGTTCTAGAGAACATGATATCTGAACAAAAAAAATTGTTCTATCAACCTTTTGTGAATAAATCCGATGCAAAAAATTTCTTTAATTTGTCTCCAAAAGCATATAGATGGGGGAATCCATGTGCAACTAATCTTAGACAAATTTCTTGGTCAGAAGCATTTCATTTTTCTCTGACAGATTTTTCAAGTATGGATCAACACATAACTTTGAGATCAAGCCTTGAAGCTTTTGCAACAAGAATGGACACTCTTGGTGAAAATTTGGCAAATATTTTGGCCCTCAAATTGAATATGAAATCCAACCATTTCCAAGAAAATTACTTGCCAAAAAGTTCTTTCATTCGGCTCAATAGATATCCTCAATGCCCTATACCTTCAAAGGTGTATGGACTATTGCCCCATAGTGATACTAGTTTCCTTACCATCCTCTATCAAGACATTGTTGGTGGCTTGCAATTGAAGAAAGATGAAAAATGGGTTGGTGTCAAGCCTAATCCACAAGCTCTAGTTGTTAATATTGGTGATTTATTTCAGGCATTGAGCAATAACGTTTACAAAAGCATAAAACACAGAGTGGTTGCTGCTGAACATGTAGAGAGGTTTTCTACAGCATTTTTCTATTCCCCCTTCGAAGATGCAATTATACAAAGTGAAAACAAGCCAACCATATACAAAAAATTCACTTTGAGAGAATATAGAAAGCAGAATGAGAAAGATGTCAAGCAAACGGGGGATAAAGTGGGCCTCTCTAGATTTATTATCATTTAG 993 0.3545 MDHEPPFLNTYKTLLEKSSENDDDLYSMVEKSEELPLIDLEKLLNPHERDECMKEISEAASEWGFFQVINHGISKEVLENMISEQKKLFYQPFVNKSDAKNFFNLSPKAYRWGNPCATNLRQISWSEAFHFSLTDFSSMDQHITLRSSLEAFATRMDTLGENLANILALKLNMKSNHFQENYLPKSSFIRLNRYPQCPIPSKVYGLLPHSDTSFLTILYQDIVGGLQLKKDEKWVGVKPNPQALVVNIGDLFQALSNNVYKSIKHRVVAAEHVERFSTAFFYSPFEDAIIQSENKPTIYKKFTLREYRKQNEKDVKQTGDKVGLSRFIII 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02141 330 Pfam 2OG-Fe(II) oxygenase superfamily 189 284 IPR044861 -
Car01g02141 330 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 9 323 - -
Car01g02141 330 Gene3D - 32 326 IPR027443 -
Car01g02141 330 Pfam non-haem dioxygenase in morphine synthesis N-terminal 35 133 IPR026992 -
Car01g02141 330 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 9 323 - -
Car01g02141 330 SUPERFAMILY Clavaminate synthase-like 29 311 - -
Car01g02141 330 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 185 284 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02141 Car-Chr1 47004116 47008998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02141 34 307 Glycosyltransferase AT5G59530 32.302 4.39e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02141 - K04125 lja:Lj0g3v0081939.2 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02141 01 47004116 47008998 Car01g02141 01 47004116 47008998 ECH