Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02140 ATGGATTATGATCCACCTTTTTTAGAGACCTACAACACCCTTTTACAAGGTGCCAACAATATTAGTGACATAAATGATCACAAATCCTCTATGGTACAAAAGTGTGATGAGATACCTCTAATTGATCTAAAACGTTTAAAACTTAGTCACCTTGAGAGAGAAGAATGCATGAAAGAAATAAGTGAAGCAGCTAGAAAATGGGGATTTTTCCAAGTTGTGAATCATGGAGTTTCACAAGAGGTTCTAGAGAGGATGCACTTTCAACAAAAGGAAGTGTTCCGAACATCTTTTGTAATTAAATCACAAGAGAATTTTTTGAACTTGCCTTCAAGAAGTTATAGGTGGGGGAATTCATTTGCCACTAATCCAAAGCAATTCATGTGGTCAGAAGCTTTGCACATGTTTGTTCCTGATCTTGCAAAGATGATCCATCACCACAAAAGTTTAAGATCAACAATTGAAGACTTTGTAACAGTAGTTACTCCTTTGGCAGAGAAGTTGGTGGAAATTCTAGCACAAGAGTTGAACATAAAATTCAATTATTTCCAAAAGAATTGTTCATCAAACACTTGTTATCTTCGCCTCAATAGATATCCACTATGTCCATTCCCTTCAAAGGTGATTGGCTTTTTACCTCATGCTGATTCTAGTTTCCTTACTATAGTACATCAAGATCATATTGGTGGGTTGCAATTGATGAAACATGGAAATTGGATTCCTGTCAAACCTAATTCTCAAGCTCTCATTGTTAATATTGGTGATTTGTTCCAGGCACTAAGCAATGGGGTGTACAAGAGTGTTGAACATCGAGTGATTGCTGCTGAGAAAGTGGAAAGATTTTCTATGGCATATTTCTATAGCCCTTCCATTGATGCTGTGATAGAGAGCTATGCCACGCCGCCATTATACAAGAAATTTACTTTTGGAGAGTATAAAGACCAAATAATGAAAGATGTTAAGGAAGGTGGTGATAAAGTGGGCCTATCTAGGTTTCTCTTGTAG 1002 0.3683 MDYDPPFLETYNTLLQGANNISDINDHKSSMVQKCDEIPLIDLKRLKLSHLEREECMKEISEAARKWGFFQVVNHGVSQEVLERMHFQQKEVFRTSFVIKSQENFLNLPSRSYRWGNSFATNPKQFMWSEALHMFVPDLAKMIHHHKSLRSTIEDFVTVVTPLAEKLVEILAQELNIKFNYFQKNCSSNTCYLRLNRYPLCPFPSKVIGFLPHADSSFLTIVHQDHIGGLQLMKHGNWIPVKPNSQALIVNIGDLFQALSNGVYKSVEHRVIAAEKVERFSMAYFYSPSIDAVIESYATPPLYKKFTFGEYKDQIMKDVKEGGDKVGLSRFLL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02140 333 SUPERFAMILY Clavaminate synthase-like 31 318 - -
Car01g02140 333 Gene3D - 17 313 IPR027443 -
Car01g02140 333 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 13 326 - -
Car01g02140 333 Pfam 2OG-Fe(II) oxygenase superfamily 193 288 IPR044861 -
Car01g02140 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 187 288 IPR005123 -
Car01g02140 333 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 13 326 - -
Car01g02140 333 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 136 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02140 Car-Chr1 46987933 46992635 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02140 37 322 Glycosyltransferase AT5G59530 29.508 5.61e-42 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02140 - K04125 gmx:100790757 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02140 01 46987933 46992635 Car01g02140 01 46987933 46992635 ECH