Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02138 atGCGCTACTACTACGTTATTAGAAATCTATGCACCACTCGTTTCCGTTCACATTCAGCCACCACTTTCACCGCTCAttcttcttctttttcatcatcttcttcttcGACCCTTTCTAAATTCGATGGTGATTCTATCCTTGCAAGCCTCAAACTTAATCGAAACTCTGATTCTGATGAATTGTCTGATGATGTTTTTAAGCAGGTTTCTTCTATTTTCTACGGTGATCAGTCAGTCAAGACACCCATTTATGAGGAAATTGATGGTGCAAATGAGTTTGAAAGAATCCTGAGTATGTTGCAGGTGCCAAATGCACCTCAAAGCAATATATCAGTGCGGCGAAAAGAGCTTTCTCGTGAAAAGAAAAGAAAATGCATCTTCAAAATTACTCAAGAAAACCGTTTTCGCCGCTTAATTGAAAGTTGTGCAAAGATACTAGGAACTGAGGAAACTGTTGAGTTGTTTGATAAAATGGGACAAAAACCAGGTGTGAAAGGATATAATGCAATGGTAGAATTATGCATAGGTAAAGCTAGGGGAGCTGAGAATGAAGACATTGCAACAGAAGAAATAGGGAAGGTTTTTCAGCTTCTTGAGTTAATGAGAAAACAGGGTTTAGAGGTAGAAGAGCGAACATATCGCCCTCTTCTTTTGTATTTAATTGACATGGGTTTGGTTGAAGAGTTTGAGTTTTTCTGTCATGTTATCAAAGATGAGAATCCTAGTTCAATAGCAAGACTTGGTTACTATGAAATGACGCTGTGGTTAAGAGTTAATAACGAAGAAAAGATTCAGGGTCTATGTAATTATATTGCAGAGAATGATGGTGAGGACACTTTTGATTTACGAGAAAGTTATTTATTGGCTCTTTGTGAAAGTGAGCGGAGGGAAAATATTTTGGAGGCGCTGGAAAACATAGATATACAAAAGATTTCATCTGTTGATTCTGTAGCAAAGATATTTCAGGCATTGGGAAGACTACTAGTGGAACCTGTTGCGGAGAAGCTCCTTTTGGACTTCAAAACAAATCATGAAGCAGATAATATTACAAACTTCATTGCTAATTATGCAGTCAGCATTCCAGATTTATCGGTTGAGGATGGCATTAAAAAATTCAAGGATTTGCACCAAAAGCTAGAAGTTTTACCTTCTTCTTCATCATATGAGAAGCTCATTTTACATAACTGTGCATTGCTCAAGCAGTACACGTGCTCCGATGGAGAGTTGGATCAATTGCTTCTACTACTTGAGGAACTAAATGATACAGTCTATTGGAATGATGCTTGCTGCAGAATCATCTTGTGTTGTATTTGGAATAAGCATTTAAGTTCTGCTATTGACTTGTGTAAGCTCCTCAAGGATAAGTTACAAGATGATGAACTGGTTATGAAAGTTCTATTTGATAAGGTATTTTCTCTAATTGAGGAGTCAGAGTCCAATCATTTGCATACTTGCATGGTGTTGCTTTCAGAAATCAAGGATAAGCACGGCCTTTTGCCTTCACAAAAATGTTATGATTCTCTGCTGGTTGCTTGTGAAAACGCCAACAATAATTCACATGCTGAATGA 1569 0.369 MRYYYVIRNLCTTRFRSHSATTFTAHSSSFSSSSSSTLSKFDGDSILASLKLNRNSDSDELSDDVFKQVSSIFYGDQSVKTPIYEEIDGANEFERILSMLQVPNAPQSNISVRRKELSREKKRKCIFKITQENRFRRLIESCAKILGTEETVELFDKMGQKPGVKGYNAMVELCIGKARGAENEDIATEEIGKVFQLLELMRKQGLEVEERTYRPLLLYLIDMGLVEEFEFFCHVIKDENPSSIARLGYYEMTLWLRVNNEEKIQGLCNYIAENDGEDTFDLRESYLLALCESERRENILEALENIDIQKISSVDSVAKIFQALGRLLVEPVAEKLLLDFKTNHEADNITNFIANYAVSIPDLSVEDGIKKFKDLHQKLEVLPSSSSYEKLILHNCALLKQYTCSDGELDQLLLLLEELNDTVYWNDACCRIILCCIWNKHLSSAIDLCKLLKDKLQDDELVMKVLFDKVFSLIEESESNHLHTCMVLLSEIKDKHGLLPSQKCYDSLLVACENANNNSHAE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02138 522 PANTHER OS02G0132600 PROTEIN 401 521 - -
Car01g02138 522 PANTHER OS02G0132600 PROTEIN 67 400 - -
Car01g02138 522 Gene3D Tetratricopeptide repeat domain 130 328 IPR011990 GO:0005515
Car01g02138 522 PANTHER OS02G0132600 PROTEIN 401 521 - -
Car01g02138 522 PANTHER OS02G0132600 PROTEIN 67 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02138 Car-Chr1 46962230 46966942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02138 - - mtr:MTR_2g082940 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02138 01 46962230 46966942 Car01g02138 01 46962230 46966942 ECH