Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02137 ATGGAGTCGATACTTGGTCGTGCTCTTGAATACACTCTCAAGTATTGGCTCAAATCCTTCTCACGAGATCAGTTCAAGTTACAAGGCCACACCGTTCACCTTTCCAATTTAGATATCAACGGCGACGCTTTGCATTCCAGCGTTGGATTGCCGCCGGCGTTGAATGTCGCATCCGCCAAAGTTGGAAAACTCGAGATAACGCTTCCGTCAGTTAGTAATGTGCAAATTGAACCAATTGTTATTCAAATTGATAAACTCGATCTGGTTCTTGAAGAGAATTCTGATTTCGATGCATCTTCAAGTTCAAATAGTTCAGCGACCTCTGCTGCTACAGCCAAGGGAAGCAAGACTAGCGGTTACGGTTTTGCTGATAAGGTCGCAGATGGCATGACTATACAAATTCATACAGTTAATCTATTACTTGAAACTCGCGGTGGTTCTCGTCGCCCAGGTGGAGCAACATGGGCACCACCTATGGCATCTATCACCATACGCAACCTTTTGCTGTATACCACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCACGGGACTTCTCCAGTAACACGAAGTACATATATGTCTTCAAAAAACTGGAATGGGAATCTTTGTCTATTGATCTTTTGCCGCATCCAGACATGTTTGCTGATGTTACATTTGGCCGCTCTGAAGAGGGATCAAACCTGAGGGATGATGATGGTGCAAAAAGAGTATTCTTTGGAGGAGAGCGTTTTGTGGAAGGAATATCAGGAGAAGCATATATAACGATTCAGAGAACTGAATTGAATAGCCCACTTGGACTTGAGGTTCAATTGCACATCAACGAAGCTGTTTGCCCTGCGTTAAGTGAACCAGGACTTCGTGCACTTCTTCGCTTCATGACCGGAGTATATGTTTGTCTAAACAGGGGTGATGTTGATTCAAAGGCTCAACAGCGATCCACTGAAGCAGCTGGGTGTTCTCTTGTTTCAATTGTCGTAGATCATATGTTTCTTTGCATTAAAGATACTGAGTTCCAGCTTGAGTTTTTGATGCAGTCCCTCTTTTTCTCTAGGGCCAGTCTTTCTGAAGTAGATAATGACAAGAACTTAACCAAGATTTCAATTGCTGGATTATTTTTAAGGGACACCTTTTCCTCCCCTCCATGTACTTTAGTGCAACCATCAATGCAAGCTTTCACTGGAGATGCTTTTGATGTGCCAGAATTTGCTAGAAGCTTTTCCCCCCCGATATATCCTCTAGGAGAACAACAATGGCAGTTAAGTGAGGGAACCCCTCTAATATGCCTCCATGCTCTCCAGATCATACCTTCTCCACTTCCACCATCCTTTGCTTCTAAAACCGTTATTGACTGTCAGCCTCTGATGATTCATCTCCAAGAAGATTCATGCCTGAGGATATCCTCTTTTTTAGCTGATGGTATTGTTGTCAGTCCTGGTGACATCTTACCAGATTTCTCAGTGAAATCTTTTATTTTCACTCTCAAGGGATTGGATCTTACAGTTCCTTTTGACAAGGCCAAAATGGATACTTCTAAAAGTGACATAGACAATACACTCCATACATCCTTTACTGGAGCAAGGCTTCATATTGAAAGCCTTTCATTTTTAGATTCACCTTCATTGAAACTAAGAATGCTGAACCTTGAGAAGGATCCTGCTTGCTTCTGTCTCTGGGAAGGTCAACCAGTTGATGCTACCCAGAAGAAGTGGACTGCCAGAGCATCCCAGCTTACTTTGTCTCTGGAAGCATGCACCGGTACAACTGGACGTCAGACTGCAGGATTGTGGAGATGTGTTGATCTGACAGAAGCTTGCATTGAAGTAGCCATGGCAACCGCTGATGGAAGCCCGTTGTTAAAAATTCCTCCTCCTGGGGGTATTGTCAGGGTTGGAGTTGCTTGCGAACAGTATTTGTCCAACACTTCTGTTGAGCAATTATTTTATGTCCTAGATCTATACGGTTATTTTGGAAAAGTTAGTGAAATGATGGCAATGGCTGGAAAAAAGAAACAACTGGAGGACGTTGGGCACAAATCTTTCAGTGGAAAGCTTATGGACAAGGCTCCTAGTGACACTGCTGTGAGTTTATCAGTGAAAGACCTCCAACTTCGATTCCTGGAGTCTTCACCAATGATTGTTGAGGGACTGCCATTAGTGCAATTTGTTGGAAATGATCTGTTTACCAGTGCCACTCATAGAACCCTTGGTGGGGCTATTGTTGTTTCATCTTCTCTACGCTGGGAGAGTGTTGAGATAAGTTGTGTGGATGCTGAGGGGAAGTTGGCATCTGAAAGTGGCTCTTTCTTGAGTTCTAGCATAAATGTTCCTTCACCAAGTGACAATGGATATCCTCAACTAAGAGCTGTATTCTGGGTGCATAAGAACGAGAGACATCAAATGGATGGAAATGCTCATTCAATCCCTTTTCTTGACATAAGCATGGTCCAAGTCATACCATTACATGAACAAGACTTGGAGTCTCATAGTTTGAATGTCTCAGCTTCCATATCTGGTGTTCGTCTTGGTGGGGGAATGAACTATACTGAAGCCCTACTGCATAGATTTGGAATACTTGAGCTTGATGGAGCTCCTGGAAAGGGTCTTTGTAAAGGGTTGGAAAACTTACAAAAGGGGCCATTGTCAAAACTTTTTAAATCAACTCCTATGATTCTTGATGATTCAGAAGATGTTGAAAGCATGGGGGAAGGGAAAGAAACAGGTTTTCCACGCTTGAAGAAGCCAGATGATGTGGATGTAACTATAAAATTGAGAGACTGGTTATTTGCTCTCGAAGGTGCACAGGATATGGCTGAAAGGTGGTGGTTCTCCAGCCATGAGGATGAAGGAAGAGAAGAGAGGTGTTGGCACACATCTTTCCATAGTTTACAAGTAAATGCAAAAAGAAGCCCGAATAATGTTAAAGATGAAAAAGCACAAATGCATAGAATACAGCATCATTCAGTAGAAGTGGTTACGGTGGGAGTTCAAGGGCTGCAAATCCTGAAGCCTCATACCCAAAAAAAGGTTCCTTCATCAATGGTAATTGCCAACGGGGTTAAGGAACTTAATGACACAATTGGAGGAATTGGTCTTGAAGTTCGCCTGATATTATGTGAGGAGAATGTTGATGATGAAACGACTAACTGGGAAGTGGAAAATCTAAAATTCTCAGTTGGACAGCCGGTTGAGGTGGTTGTAACGAAGGATGAGGTTCAGCACCTTACTTTTTTGTGCAAATCTGAAATTGATTCAATTGGACGGATAACTGCTGGAATTATACGGTTGCTTAAGTTAGAAGGCTCTATTGGTCAGTCTGTAGTAGATCAACTAGGCAACCTAGgaagtgaaggcattgacaagatcttctcttctgaaaaggctagtagagatggtagtgttagtagtagaggactttctcCATTACCAAACTCCTTAATTGAAGAACCAAAAAAAACTAAGGAGCAGACATTAGCTTTGCTCGAGGAAGCAGTTATGGACTCACAGGCTAAACTTAATGATTTAATCAGTGATATTGGTACTTCAGAGTCTTCTTCCTCACAACACCTTACCATCGTCAAAGTAAGTCAAAAGATCGACACTATGCAGGGCTTATTGATGCAATTGCGGAATCAACTTTAA 3645 0.4148 MESILGRALEYTLKYWLKSFSRDQFKLQGHTVHLSNLDINGDALHSSVGLPPALNVASAKVGKLEITLPSVSNVQIEPIVIQIDKLDLVLEENSDFDASSSSNSSATSAATAKGSKTSGYGFADKVADGMTIQIHTVNLLLETRGGSRRPGGATWAPPMASITIRNLLLYTTNENWQVVNLKEARDFSSNTKYIYVFKKLEWESLSIDLLPHPDMFADVTFGRSEEGSNLRDDDGAKRVFFGGERFVEGISGEAYITIQRTELNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDSKAQQRSTEAAGCSLVSIVVDHMFLCIKDTEFQLEFLMQSLFFSRASLSEVDNDKNLTKISIAGLFLRDTFSSPPCTLVQPSMQAFTGDAFDVPEFARSFSPPIYPLGEQQWQLSEGTPLICLHALQIIPSPLPPSFASKTVIDCQPLMIHLQEDSCLRISSFLADGIVVSPGDILPDFSVKSFIFTLKGLDLTVPFDKAKMDTSKSDIDNTLHTSFTGARLHIESLSFLDSPSLKLRMLNLEKDPACFCLWEGQPVDATQKKWTARASQLTLSLEACTGTTGRQTAGLWRCVDLTEACIEVAMATADGSPLLKIPPPGGIVRVGVACEQYLSNTSVEQLFYVLDLYGYFGKVSEMMAMAGKKKQLEDVGHKSFSGKLMDKAPSDTAVSLSVKDLQLRFLESSPMIVEGLPLVQFVGNDLFTSATHRTLGGAIVVSSSLRWESVEISCVDAEGKLASESGSFLSSSINVPSPSDNGYPQLRAVFWVHKNERHQMDGNAHSIPFLDISMVQVIPLHEQDLESHSLNVSASISGVRLGGGMNYTEALLHRFGILELDGAPGKGLCKGLENLQKGPLSKLFKSTPMILDDSEDVESMGEGKETGFPRLKKPDDVDVTIKLRDWLFALEGAQDMAERWWFSSHEDEGREERCWHTSFHSLQVNAKRSPNNVKDEKAQMHRIQHHSVEVVTVGVQGLQILKPHTQKKVPSSMVIANGVKELNDTIGGIGLEVRLILCEENVDDETTNWEVENLKFSVGQPVEVVVTKDEVQHLTFLCKSEIDSIGRITAGIIRLLKLEGSIGQSVVDQLGNLGSEGIDKIFSSEKASRDGSVSSRGLSPLPNSLIEEPKKTKEQTLALLEEAVMDSQAKLNDLISDIGTSESSSSQHLTIVKVSQKIDTMQGLLMQLRNQL 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02137 1214 Coils Coil 1159 1179 - -
Car01g02137 1214 MobiDBLite consensus disorder prediction 97 116 - -
Car01g02137 1214 Pfam N-terminal region of Chorein or VPS13 1 104 IPR026854 -
Car01g02137 1214 PANTHER UNCHARACTERIZED 1 1213 IPR026728 -
Car01g02137 1214 MobiDBLite consensus disorder prediction 97 115 - -
Car01g02137 1214 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1213 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02137 - - gmx:100803142 1955.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02137 01 46949582 46959594 Car01g02137 01 46949582 46959594 ECH