Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02134 ATGCAGCTTCATATATCACCAAGTTTGAGACATGTTACTGTGCTTCAAGGGAAAGGACTTAAAGAGTTTATGAAAGTGAAAGTTGCATCAAGGAGAGTTTCTTATAGGATGCTATTCTATTCACTCTTGTTCTTCACTTTTCTTCTAAGGTTTGTGTTTGTTTTAACAGCTGTGGATGGCATTGATGGAGAAAACAAGTGCTCTACCATAGGTTGTCTAGGAAAGAAGTTAGGACCAAGGATTTTGGGTAGACTACCTGAATCAACTGTCCCAGAAGTGATATACCAAACTTTAGATGAACCCCTTGGCAATGATGAACTAAAGGGAAGGTCTGATATTCCACAAACTTTAGAAGAGTTCATGGTTAAAATGAAGGAAGGTGGATATGATGCCAAGACATTTGCAGTTAAACTAAGAGAAATGGTAACCCTTATGGAACAAAGGACTAGGTTGGCGAAAATCCAAGAATATTTATATCGCCATGTAGCATCAAGCAGCATACCAAAACAACTTCATTGCCTTGACTTGAGGCTGGCACATGAGCACACCAACAATGCAGCAGCACGCCTTCAGCTACCGTCTGCAGAACTAGTTCCTGCCCTTGTTGACAATTCCTACTTCCACTTTGTCCTAGCCTCGGATAATGTGCTCGCTGCCTCGGTGGTTGCAACATCGCTTGTTCGCAACTGTTTACAGCCTAAGAAGGTTGTTCTGCACATAATTACAGACCGAAAGACTTATTATCCAATGCAGGCTTGGTTCTCATTGCATCCTTTATTGCCTGCTGTGATTGAGGTTAAGCCATTGCACCATTTCGATTGGTTTACAAAGGGAAAGGTACCAGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTTCGGTCGCAGTTTAGAGGAGGTTCGTCGGCTATAGTTGCAAATACCTCTGAGAAGCCGAGAGTTATTGCATCAAAACTACAAGCACTTAGTCCTAAGTATAATTCAGTGATGAACCACATTAGGATACATCTACCAGAGGTAAAAGAGATAGCATAG 1032 0.4147 MQLHISPSLRHVTVLQGKGLKEFMKVKVASRRVSYRMLFYSLLFFTFLLRFVFVLTAVDGIDGENKCSTIGCLGKKLGPRILGRLPESTVPEVIYQTLDEPLGNDELKGRSDIPQTLEEFMVKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYFHFVLASDNVLAASVVATSLVRNCLQPKKVVLHIITDRKTYYPMQAWFSLHPLLPAVIEVKPLHHFDWFTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPRVIASKLQALSPKYNSVMNHIRIHLPEVKEIA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02134 343 Pfam Glycosyl transferase family 8 210 339 IPR002495 GO:0016757
Car01g02134 343 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 339 - -
Car01g02134 343 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 339 IPR029993 GO:0047262
Car01g02134 343 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 339 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02134 Car-Chr1 46907505 46915371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02134 1 339 Glycosyltransferase AT5G54690 76.540 5.16e-179 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02134 K20867 - gmx:100812550 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02134 01 46907505 46915371 Car01g02134 01 46907505 46915371 ECH