Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02131 ATGGCTCCTCTAACAAATTTGCATGGTGTCTCAAAAACTTTAATTCCAACTACATGTCTTCTTCCAAATGCACAAAGGACCCTTAAAACAGGACAAGTAGTTACAAAGAAATTATCAGAATGTGATTCAATTCACACTACAAGAAGAGGAACTGCATTAAGCCTTGTTTCTTTAGTCCTTACATGGCAATTCAATGAGAAGATTTCATTAGCTAAGGATAATGGATTTTGGATTGAAGGACCTATTCCAGAACCTACAGTCACTAATGATATTGCAAATGAGAAAACGGGGACTCGTTCATTTATTAAGAAGAAACTTTACATGGCAAATATTGGTACGAAAGGAAGTGTTCTTAGGATAAAGAAATATGCATTTGATCTTTTGGCAATGGCGGATTTGATTGCACAAGACACACTCAACTATGTGAGGAGGTACCTAAGACTCAAATCTACTTTCATCTACTTTGATTTTGACAAGGTTATCTCTGCTGCTCCAGTTGACGATAAGCAGAAACTAACTGATATGGCTAACAAATTGTTTGACAATTTTGAAAAGCTTGAAGAAGCTTCAAGGAACAAAAACCTATCTGAAACACAAGCATGCTATAAGGAAACTGAAGTTATGCTTAAAGATGTCATGGACAGGATGACTATAATGTATAAAACAATTTGA 672 0.3527 MAPLTNLHGVSKTLIPTTCLLPNAQRTLKTGQVVTKKLSECDSIHTTRRGTALSLVSLVLTWQFNEKISLAKDNGFWIEGPIPEPTVTNDIANEKTGTRSFIKKKLYMANIGTKGSVLRIKKYAFDLLAMADLIAQDTLNYVRRYLRLKSTFIYFDFDKVISAAPVDDKQKLTDMANKLFDNFEKLEEASRNKNLSETQACYKETEVMLKDVMDRMTIMYKTI 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02131 223 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 216 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Car01g02131 223 Coils Coil 169 189 - -
Car01g02131 223 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 1 216 - -
Car01g02131 223 SUPERFAMILY Oxygen-evolving enhancer protein 3, 107 216 IPR023222 -
Car01g02131 223 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 26 216 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Car01g02131 223 Gene3D - 79 217 IPR023222 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02131 K08901 - gmx:100814163 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02131 01 46886977 46889364 Car01g02131 01 46886977 46889364 ECH