Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02124 ATGGTAGCTATGGCTATGGCTACTCTTCAAAGCTCCATGTCTTCCCTCTCACTCTCCTCCAACTCTTTCTTCGGACAGCCTCTCTCTCCTATTACTCTCTCCCCTCTTCTACCGGGTAAGCCAACAGGAAAGCAATGCCGTATCGTAATGAGGCTTAAACGATGGGAGCGAAAGGAATGTAAACCAAACAGCCTTCCTGTGTTACACAAATTGCATGTTAAAGTTGGAGACACGGTGAAAGTCATATCTGGACATGAAAAGGGTCAAATTGGGGAGATTACTAAGATCTTCAAGCACAACAGCACTGTCATTGTGAAAGACTTAAACTTGAAGACAAAGCATGTGAAGAGTAGAGAAGAAGGCGAACCAGGTCAAATAAATAAGGTTGAAGGACCTATCCATAGTTCAAATGTGATGCTATACTCCAAAGAAAAGAAAGTAGCAAGCCGTGTGGGTCATAAAGTACTTGACAATGGTAAAAAAGTTAGGTACCTAATAAAAACTGGAGAGGTAATTGATACTGAAGAGAATTGGAAGAAACTGAAGGAAGCTACTAAGAAAACTGAACAAGTTGCTGCTGCTTAG 585 0.4154 MVAMAMATLQSSMSSLSLSSNSFFGQPLSPITLSPLLPGKPTGKQCRIVMRLKRWERKECKPNSLPVLHKLHVKVGDTVKVISGHEKGQIGEITKIFKHNSTVIVKDLNLKTKHVKSREEGEPGQINKVEGPIHSSNVMLYSKEKKVASRVGHKVLDNGKKVRYLIKTGEVIDTEENWKKLKEATKKTEQVAAA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02124 194 PANTHER 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC 6 194 - -
Car01g02124 194 SMART kow_9 72 99 IPR005824 -
Car01g02124 194 Pfam KOW motif 75 106 IPR005824 -
Car01g02124 194 Hamap 50S ribosomal protein L24 [rplX]. 71 167 IPR003256 GO:0003735|GO:0005840|GO:0006412
Car01g02124 194 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 108 172 IPR003256 GO:0003735|GO:0005840|GO:0006412
Car01g02124 194 Gene3D - 66 171 IPR014722 -
Car01g02124 194 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 6 194 IPR003256 GO:0003735|GO:0005840|GO:0006412
Car01g02124 194 TIGRFAM rplX_bact: ribosomal protein uL24 71 172 IPR003256 GO:0003735|GO:0005840|GO:0006412
Car01g02124 194 ProSitePatterns Ribosomal protein L24 signature. 76 93 IPR005825 GO:0003735|GO:0005840|GO:0006412
Car01g02124 194 CDD KOW_RPL26 76 140 IPR041988 GO:0003723
Car01g02124 194 SUPERFAMILY Translation proteins SH3-like domain 69 171 IPR008991 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02124 K02895 - gmx:100306643 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02124 01 46838548 46841099 Car01g02124 01 46838548 46841099 ECH