Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02118 ATGTCTCTTGCACCACCCACACATGCAGTACCTGACAACACACGACCTCGTGTCAATTTTCGTCCTAGCATTTGGGGGGATGTTTTCCTTCAATATGATTCTCAATCACCGGAAATCAATGACAATATGAAGAAACAGGTACAAATGCAAAAAGAGGAAGTGAGGAAGAGTTTTCAATCTTCAAGCAGTGATATCTCACAACAACTAAACTTCATTGACTCATTGCAACGTTTGGGAGTATCTTATCATTTTGAGCGTGAAATTGATGAATCATTACAACAAATCCACAATACTTTAACCAACAATAAGGTTATCATAGAAGAAGGTAGCCTTCACTTTCTTGCATTAGCATTTCGTTTGCTTAGGCAAAAAGGACATCACATTTCAACAGATATATTTAAAAGTTTCAAGAACAATCTCGGGAATTTCGATGAAAATGTTGCCAAAGATGTTCAAGGAATGTGGAGCTTGTATGAAGCAGCGCAATTAAAGATTCACGGAGAAGATTTATTAGATGAAGCACGTGATTTCACACATGCTCACCTTAATTCCATGATAAAAAATCAATTGAGTAGTTTTCTTTATGCACAAATAAGTCAATGCTTAAAAAAACCTCTGTACAAGGGAGTTCCAAGGTTGGAGACAAGGTGTTACATGTCTTCCTACGAAGAAGATCCTTCTCATAATAAAGTTCTTCTAAACTTTGCAAAAATAGATTTCAACATGCTACAGAAAATGCACCAACAAGAACTTGCTAGTATCACCAAGTGGTGGAAAAAATTAAACTTTGCAACAAAGGTTCCTTACGCAAGGGATAGAGTGGTTGAGGCTTACTTTTGGCCATTAGCCATGTCCTATGAGCCTAACTATAGCATTGCTAGAAGGTTGGTAGGGAAGTTGATAGCATGTATTTCTCTCTTAGATGATACTTATGATGCCTACGCCACAATTGAAGAACTTGAACTCTTCACACGAGCAATCCAGAGGTGGGATATTAGTCTCATTCAATCCCTTCCAGAGTGCATGAAAGTGGTATTTAACACAATTGTAGGACTGTGGGATGAAATAGAAATGAGCTTGGTAGAAAGTGGAAAATCTTATTTGGTGGTGGAATATATTAAACCAGCTTTTTATAAATTGGCACGATCCTATTTTGTTGAATCAAAATGGTGCAATGAAGGATATATTCCAACATATGATGAGTACAAGGCTAATGGAATTATGTCCTCTACATGCCCACTTCAAATAATAGTGTTTCTTGGGCTTGGAGAATTTTCAAACAAAGAGTTGCTTGATTGGATTTTCAGTGATCCAATAATTGTTGTAGCTGTATCAGTTGTTGGTAGACTCACGGATGACATATCTTCACATAAGTTTGAGCAGCAGAGAGTGCATGTTGCTTCATCAGTTGAATGTTGCATGAAGCAATACAACATGTCTCAAGAAGAAGCTTATAAACTGATTAACAAGGACATTTTAGATTTTTGGATGGATATAAATGAAGAGTGCTTGAAGTTAGATAGCATCCCAAGGCCTGTGCTTGATTGTATTCTTAATGTGGCACGAGTAACTGAGTTCACCTATGACAATTTTGAGGACAAATACACAAATGGGGAACTATTGAAAGAATATGTTGTTGCATTGCTTATAGATCCAATATGA 1662 0.3688 MSLAPPTHAVPDNTRPRVNFRPSIWGDVFLQYDSQSPEINDNMKKQVQMQKEEVRKSFQSSSSDISQQLNFIDSLQRLGVSYHFEREIDESLQQIHNTLTNNKVIIEEGSLHFLALAFRLLRQKGHHISTDIFKSFKNNLGNFDENVAKDVQGMWSLYEAAQLKIHGEDLLDEARDFTHAHLNSMIKNQLSSFLYAQISQCLKKPLYKGVPRLETRCYMSSYEEDPSHNKVLLNFAKIDFNMLQKMHQQELASITKWWKKLNFATKVPYARDRVVEAYFWPLAMSYEPNYSIARRLVGKLIACISLLDDTYDAYATIEELELFTRAIQRWDISLIQSLPECMKVVFNTIVGLWDEIEMSLVESGKSYLVVEYIKPAFYKLARSYFVESKWCNEGYIPTYDEYKANGIMSSTCPLQIIVFLGLGEFSNKELLDWIFSDPIIVVAVSVVGRLTDDISSHKFEQQRVHVASSVECCMKQYNMSQEEAYKLINKDILDFWMDINEECLKLDSIPRPVLDCILNVARVTEFTYDNFEDKYTNGELLKEYVVALLIDPI 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02118 553 Pfam Terpene synthase, N-terminal domain 24 201 IPR001906 GO:0010333|GO:0016829
Car01g02118 553 Gene3D - 63 228 IPR036965 GO:0010333|GO:0016829
Car01g02118 553 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 7 551 - -
Car01g02118 553 SFLD Isoprenoid Synthase Type I 228 553 - -
Car01g02118 553 PANTHER OS04G0344100 PROTEIN-RELATED 7 551 - -
Car01g02118 553 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 22 228 IPR008930 -
Car01g02118 553 SUPERFAMILY Terpenoid synthases 228 553 IPR008949 -
Car01g02118 553 Pfam Terpene synthase family, metal binding domain 233 497 IPR005630 GO:0000287|GO:0010333|GO:0016829
Car01g02118 553 Gene3D Farnesyl Diphosphate Synthase 22 539 IPR008949 -
Car01g02118 553 SFLD Terpene Cyclase Like 1 C Terminal Domain 228 553 IPR034741 -
Car01g02118 553 CDD Terpene_cyclase_plant_C1 15 552 IPR044814 GO:0010333|GO:0016102
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02118 Car-Chr1 46783893 46786901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02118 K15803 - gmx:100781367 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02118 01 46783893 46786901 Car01g02118 01 46783893 46786901 ECH